Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS06360 and HSERO_RS06365 are separated by 225 nucleotides HSERO_RS06365 and HSERO_RS06370 are separated by 61 nucleotides HSERO_RS06370 and HSERO_RS06375 are separated by 127 nucleotides
HSERO_RS06360: HSERO_RS06360 - transcription regulator protein, at 1,437,275 to 1,437,871
_RS06360
HSERO_RS06365: HSERO_RS06365 - hypothetical protein, at 1,438,097 to 1,438,387
_RS06365
HSERO_RS06370: HSERO_RS06370 - aromatic compound catabolic protein, at 1,438,449 to 1,438,994
_RS06370
HSERO_RS06375: HSERO_RS06375 - acyl-CoA transferase/carnitine dehydratase, at 1,439,122 to 1,440,531
_RS06375
Position (kb) 1438
1439 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1437.572 kb on + strand, within HSERO_RS06360 at 1437.751 kb on + strand, within HSERO_RS06360 at 1437.806 kb on + strand, within HSERO_RS06360 at 1437.873 kb on - strand at 1438.183 kb on - strand, within HSERO_RS06365 at 1438.321 kb on + strand, within HSERO_RS06365 at 1438.413 kb on + strand at 1438.413 kb on + strand at 1438.679 kb on + strand, within HSERO_RS06370 at 1438.768 kb on - strand at 1438.768 kb on - strand, within HSERO_RS06370 at 1438.806 kb on - strand, within HSERO_RS06370 at 1438.837 kb on - strand, within HSERO_RS06370 at 1438.979 kb on - strand at 1439.120 kb on + strand at 1439.204 kb on + strand at 1439.292 kb on + strand, within HSERO_RS06375 at 1439.322 kb on - strand, within HSERO_RS06375 at 1439.355 kb on + strand, within HSERO_RS06375 at 1439.478 kb on + strand, within HSERO_RS06375 at 1439.648 kb on + strand, within HSERO_RS06375 at 1439.661 kb on + strand, within HSERO_RS06375 at 1439.669 kb on - strand, within HSERO_RS06375 at 1439.682 kb on - strand, within HSERO_RS06375
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 1,437,572 + HSERO_RS06360 0.50 +0.2 1,437,751 + HSERO_RS06360 0.80 +0.4 1,437,806 + HSERO_RS06360 0.89 -0.4 1,437,873 - -0.0 1,438,183 - HSERO_RS06365 0.30 +0.1 1,438,321 + HSERO_RS06365 0.77 +0.0 1,438,413 + +0.7 1,438,413 + -0.4 1,438,679 + HSERO_RS06370 0.42 +0.6 1,438,768 - +0.8 1,438,768 - HSERO_RS06370 0.58 -0.5 1,438,806 - HSERO_RS06370 0.65 +0.6 1,438,837 - HSERO_RS06370 0.71 +1.1 1,438,979 - +0.4 1,439,120 + +0.1 1,439,204 + +0.9 1,439,292 + HSERO_RS06375 0.12 -3.0 1,439,322 - HSERO_RS06375 0.14 -0.3 1,439,355 + HSERO_RS06375 0.17 -2.0 1,439,478 + HSERO_RS06375 0.25 +0.1 1,439,648 + HSERO_RS06375 0.37 +0.9 1,439,661 + HSERO_RS06375 0.38 +0.5 1,439,669 - HSERO_RS06375 0.39 -0.2 1,439,682 - HSERO_RS06375 0.40 +0.9
Or see this region's nucleotide sequence