Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06270

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,412,176	-				-1.5
1,412,180	+		HSERO_RS06265	0.36	+0.2
1,412,305	-		HSERO_RS06265	0.52	-0.3
1,412,641	+				+0.1
1,412,648	+				+0.1
1,412,763	-				+0.8
1,412,987	-				+1.8
1,413,069	+				-0.6
1,413,089	+				+0.2
1,413,116	-				-0.9
1,413,256	+		HSERO_RS06270	0.12	+0.4
1,413,356	-		HSERO_RS06270	0.25	+0.2
1,413,401	-				+0.8
1,413,518	+		HSERO_RS06270	0.46	+1.4
1,413,675	-		HSERO_RS06270	0.66	+0.2
1,413,916	+				+0.1
1,413,928	+				-0.2
1,414,080	-		HSERO_RS06275	0.17	-0.2
1,414,188	+		HSERO_RS06275	0.29	+0.3
1,414,268	+		HSERO_RS06275	0.38	-0.1
1,414,507	-		HSERO_RS06275	0.65	+0.8
1,414,564	+		HSERO_RS06275	0.71	-0.2
1,414,625	-		HSERO_RS06275	0.78	-0.3
1,414,738	-				-0.4
1,414,835	+				-0.1
1,414,835	+				+0.2