Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03875 and HSERO_RS03880 are separated by 61 nucleotides HSERO_RS03880 and HSERO_RS03885 are separated by 257 nucleotides HSERO_RS03885 and HSERO_RS03890 are separated by 63 nucleotides HSERO_RS03890 and HSERO_RS03895 are separated by 228 nucleotides
HSERO_RS03875: HSERO_RS03875 - hypothetical protein, at 855,828 to 856,037
_RS03875
HSERO_RS03880: HSERO_RS03880 - hypothetical protein, at 856,099 to 856,281
_RS03880
HSERO_RS03885: HSERO_RS03885 - hypothetical protein, at 856,539 to 858,266
_RS03885
HSERO_RS03890: HSERO_RS03890 - hypothetical protein, at 858,330 to 858,926
_RS03890
HSERO_RS03895: HSERO_RS03895 - SAM-dependent methyltransferase, at 859,155 to 860,726
_RS03895
Position (kb) 856
857
858
859 Strain fitness (log2 ratio) -1
0
1
2 at 855.545 kb on + strand at 855.658 kb on - strand at 855.735 kb on - strand at 855.928 kb on + strand, within HSERO_RS03875 at 855.953 kb on + strand, within HSERO_RS03875 at 856.260 kb on - strand, within HSERO_RS03880 at 856.566 kb on + strand at 856.574 kb on - strand at 856.762 kb on - strand, within HSERO_RS03885 at 856.762 kb on - strand, within HSERO_RS03885 at 856.845 kb on + strand, within HSERO_RS03885 at 857.032 kb on - strand, within HSERO_RS03885 at 857.069 kb on + strand, within HSERO_RS03885 at 857.077 kb on + strand, within HSERO_RS03885 at 857.194 kb on + strand, within HSERO_RS03885 at 857.574 kb on - strand, within HSERO_RS03885 at 857.603 kb on - strand, within HSERO_RS03885 at 857.653 kb on + strand, within HSERO_RS03885 at 857.655 kb on + strand, within HSERO_RS03885 at 857.741 kb on + strand, within HSERO_RS03885 at 857.758 kb on + strand, within HSERO_RS03885 at 857.873 kb on - strand, within HSERO_RS03885 at 858.066 kb on + strand, within HSERO_RS03885 at 858.255 kb on + strand at 858.269 kb on - strand at 858.337 kb on + strand at 858.589 kb on + strand, within HSERO_RS03890 at 858.831 kb on - strand, within HSERO_RS03890 at 858.859 kb on + strand, within HSERO_RS03890 at 859.158 kb on + strand at 859.175 kb on + strand at 859.263 kb on - strand at 859.263 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 855,545 + +0.5 855,658 - -0.2 855,735 - +1.0 855,928 + HSERO_RS03875 0.48 +1.8 855,953 + HSERO_RS03875 0.60 +0.4 856,260 - HSERO_RS03880 0.88 +0.9 856,566 + +1.0 856,574 - -1.5 856,762 - HSERO_RS03885 0.13 -0.1 856,762 - HSERO_RS03885 0.13 +0.4 856,845 + HSERO_RS03885 0.18 +1.8 857,032 - HSERO_RS03885 0.29 +1.1 857,069 + HSERO_RS03885 0.31 -0.4 857,077 + HSERO_RS03885 0.31 +0.3 857,194 + HSERO_RS03885 0.38 +0.4 857,574 - HSERO_RS03885 0.60 +2.0 857,603 - HSERO_RS03885 0.62 -0.2 857,653 + HSERO_RS03885 0.64 +1.1 857,655 + HSERO_RS03885 0.65 +0.7 857,741 + HSERO_RS03885 0.70 +1.1 857,758 + HSERO_RS03885 0.71 +1.5 857,873 - HSERO_RS03885 0.77 -0.7 858,066 + HSERO_RS03885 0.88 -0.6 858,255 + -1.0 858,269 - -0.6 858,337 + +0.4 858,589 + HSERO_RS03890 0.43 +0.1 858,831 - HSERO_RS03890 0.84 -0.6 858,859 + HSERO_RS03890 0.89 +0.3 859,158 + +0.1 859,175 + +0.9 859,263 - -0.1 859,263 - +0.5
Or see this region's nucleotide sequence