Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03870 and HSERO_RS03875 are separated by 587 nucleotides HSERO_RS03875 and HSERO_RS03880 are separated by 61 nucleotides HSERO_RS03880 and HSERO_RS03885 are separated by 257 nucleotides
HSERO_RS03870: HSERO_RS03870 - hypothetical protein, at 854,896 to 855,240
_RS03870
HSERO_RS03875: HSERO_RS03875 - hypothetical protein, at 855,828 to 856,037
_RS03875
HSERO_RS03880: HSERO_RS03880 - hypothetical protein, at 856,099 to 856,281
_RS03880
HSERO_RS03885: HSERO_RS03885 - hypothetical protein, at 856,539 to 858,266
_RS03885
Position (kb) 856
857 Strain fitness (log2 ratio) -1
0
1
2 at 855.117 kb on - strand, within HSERO_RS03870 at 855.175 kb on - strand at 855.365 kb on - strand at 855.365 kb on - strand at 855.437 kb on + strand at 855.471 kb on - strand at 855.545 kb on + strand at 855.658 kb on - strand at 855.735 kb on - strand at 855.928 kb on + strand, within HSERO_RS03875 at 855.953 kb on + strand, within HSERO_RS03875 at 856.260 kb on - strand, within HSERO_RS03880 at 856.566 kb on + strand at 856.574 kb on - strand at 856.762 kb on - strand, within HSERO_RS03885 at 856.762 kb on - strand, within HSERO_RS03885 at 856.845 kb on + strand, within HSERO_RS03885 at 857.032 kb on - strand, within HSERO_RS03885 at 857.069 kb on + strand, within HSERO_RS03885 at 857.077 kb on + strand, within HSERO_RS03885 at 857.194 kb on + strand, within HSERO_RS03885
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 855,117 - HSERO_RS03870 0.64 +0.0 855,175 - -0.2 855,365 - +0.2 855,365 - +2.0 855,437 + +1.1 855,471 - +0.1 855,545 + +0.5 855,658 - -0.2 855,735 - +1.0 855,928 + HSERO_RS03875 0.48 +1.8 855,953 + HSERO_RS03875 0.60 +0.4 856,260 - HSERO_RS03880 0.88 +0.9 856,566 + +1.0 856,574 - -1.5 856,762 - HSERO_RS03885 0.13 -0.1 856,762 - HSERO_RS03885 0.13 +0.4 856,845 + HSERO_RS03885 0.18 +1.8 857,032 - HSERO_RS03885 0.29 +1.1 857,069 + HSERO_RS03885 0.31 -0.4 857,077 + HSERO_RS03885 0.31 +0.3 857,194 + HSERO_RS03885 0.38 +0.4
Or see this region's nucleotide sequence