Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS03540

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
771,575	-		HSERO_RS03540	0.28	+1.0
771,951	+		HSERO_RS03540	0.77	+0.3
772,250	+				-0.3
772,304	-				-0.2
772,397	-		HSERO_RS03545	0.17	-0.8
772,413	+		HSERO_RS03545	0.21	+0.1
772,557	+		HSERO_RS03545	0.60	-0.0
772,656	-		HSERO_RS03545	0.86	+0.3
772,746	-				-0.3
772,773	-				+0.1
772,793	+				+2.7
772,794	+				+0.2
772,802	-				-0.0
772,980	-		HSERO_RS03550	0.17	-1.2
772,992	-		HSERO_RS03550	0.20	+0.1