Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02990 and HSERO_RS02995 are separated by 21 nucleotides HSERO_RS02995 and HSERO_RS03000 are separated by 10 nucleotides HSERO_RS03000 and HSERO_RS03005 overlap by 4 nucleotides
HSERO_RS02990: HSERO_RS02990 - ABC transporter substrate-binding protein, at 656,765 to 657,772
_RS02990
HSERO_RS02995: HSERO_RS02995 - ABC transporter permease, at 657,794 to 658,669
_RS02995
HSERO_RS03000: HSERO_RS03000 - ABC transporter permease, at 658,680 to 659,483
_RS03000
HSERO_RS03005: HSERO_RS03005 - ABC transporter ATP-binding protein, at 659,480 to 660,565
_RS03005
Position (kb) 658
659
660 Strain fitness (log2 ratio) -1
0
1
2 at 657.872 kb on + strand at 657.885 kb on - strand, within HSERO_RS02995 at 657.899 kb on + strand, within HSERO_RS02995 at 657.904 kb on + strand, within HSERO_RS02995 at 658.003 kb on + strand, within HSERO_RS02995 at 658.184 kb on - strand, within HSERO_RS02995 at 658.218 kb on - strand, within HSERO_RS02995 at 658.279 kb on + strand, within HSERO_RS02995 at 658.520 kb on - strand, within HSERO_RS02995 at 658.533 kb on - strand, within HSERO_RS02995 at 658.671 kb on - strand at 658.714 kb on + strand at 658.722 kb on - strand at 658.825 kb on + strand, within HSERO_RS03000 at 658.835 kb on + strand, within HSERO_RS03000 at 659.008 kb on + strand, within HSERO_RS03000 at 659.080 kb on + strand, within HSERO_RS03000 at 659.374 kb on + strand, within HSERO_RS03000 at 659.382 kb on - strand, within HSERO_RS03000 at 659.511 kb on + strand at 659.519 kb on - strand at 659.767 kb on - strand, within HSERO_RS03005 at 659.777 kb on - strand, within HSERO_RS03005 at 659.910 kb on - strand, within HSERO_RS03005 at 659.955 kb on - strand, within HSERO_RS03005 at 659.974 kb on + strand, within HSERO_RS03005 at 660.014 kb on + strand, within HSERO_RS03005 at 660.083 kb on - strand, within HSERO_RS03005 at 660.105 kb on - strand, within HSERO_RS03005 at 660.220 kb on + strand, within HSERO_RS03005
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 657,872 + -0.1 657,885 - HSERO_RS02995 0.10 +0.4 657,899 + HSERO_RS02995 0.12 +0.7 657,904 + HSERO_RS02995 0.13 -1.4 658,003 + HSERO_RS02995 0.24 +0.4 658,184 - HSERO_RS02995 0.45 +0.4 658,218 - HSERO_RS02995 0.48 -0.9 658,279 + HSERO_RS02995 0.55 +0.6 658,520 - HSERO_RS02995 0.83 -0.1 658,533 - HSERO_RS02995 0.84 +0.1 658,671 - +0.1 658,714 + +0.7 658,722 - +0.4 658,825 + HSERO_RS03000 0.18 +2.3 658,835 + HSERO_RS03000 0.19 -0.1 659,008 + HSERO_RS03000 0.41 +1.2 659,080 + HSERO_RS03000 0.50 +0.0 659,374 + HSERO_RS03000 0.86 -0.3 659,382 - HSERO_RS03000 0.87 +0.8 659,511 + +0.6 659,519 - +0.2 659,767 - HSERO_RS03005 0.26 -0.2 659,777 - HSERO_RS03005 0.27 -1.2 659,910 - HSERO_RS03005 0.40 -0.8 659,955 - HSERO_RS03005 0.44 +0.9 659,974 + HSERO_RS03005 0.45 -0.6 660,014 + HSERO_RS03005 0.49 +0.5 660,083 - HSERO_RS03005 0.56 +1.1 660,105 - HSERO_RS03005 0.58 +0.3 660,220 + HSERO_RS03005 0.68 -0.1
Or see this region's nucleotide sequence