Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02920 and HSERO_RS02925 are separated by 242 nucleotides HSERO_RS02925 and HSERO_RS02930 are separated by 11 nucleotides HSERO_RS02930 and HSERO_RS02935 are separated by 316 nucleotides
HSERO_RS02920: HSERO_RS02920 - major facilitator superfamily protein, at 641,473 to 642,759
_RS02920
HSERO_RS02925: HSERO_RS02925 - 3-oxoacyl-ACP reductase, at 643,002 to 643,736
_RS02925
HSERO_RS02930: HSERO_RS02930 - cupin, at 643,748 to 644,275
_RS02930
HSERO_RS02935: HSERO_RS02935 - LysR family transcriptional regulator, at 644,592 to 645,491
_RS02935
Position (kb) 643
644
645 Strain fitness (log2 ratio) -1
0
1
2 at 642.882 kb on - strand at 642.895 kb on - strand at 642.908 kb on + strand at 643.074 kb on - strand at 643.293 kb on + strand, within HSERO_RS02925 at 643.413 kb on - strand, within HSERO_RS02925 at 643.439 kb on + strand, within HSERO_RS02925 at 643.447 kb on - strand, within HSERO_RS02925 at 643.447 kb on - strand, within HSERO_RS02925 at 643.447 kb on - strand, within HSERO_RS02925 at 643.663 kb on - strand at 643.694 kb on - strand at 643.753 kb on + strand at 643.850 kb on - strand, within HSERO_RS02930 at 643.853 kb on + strand, within HSERO_RS02930 at 643.970 kb on + strand, within HSERO_RS02930 at 644.155 kb on + strand, within HSERO_RS02930 at 644.214 kb on + strand, within HSERO_RS02930 at 644.222 kb on - strand, within HSERO_RS02930 at 644.270 kb on + strand at 644.278 kb on - strand at 644.278 kb on - strand at 644.914 kb on - strand, within HSERO_RS02935 at 644.926 kb on + strand, within HSERO_RS02935 at 644.936 kb on + strand, within HSERO_RS02935 at 644.936 kb on + strand, within HSERO_RS02935 at 645.037 kb on - strand, within HSERO_RS02935 at 645.043 kb on - strand, within HSERO_RS02935 at 645.080 kb on - strand, within HSERO_RS02935 at 645.080 kb on - strand, within HSERO_RS02935 at 645.218 kb on - strand, within HSERO_RS02935
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 642,882 - +0.6 642,895 - -1.5 642,908 + +0.2 643,074 - -0.2 643,293 + HSERO_RS02925 0.40 +0.1 643,413 - HSERO_RS02925 0.56 -0.6 643,439 + HSERO_RS02925 0.59 +0.5 643,447 - HSERO_RS02925 0.61 -0.6 643,447 - HSERO_RS02925 0.61 -0.2 643,447 - HSERO_RS02925 0.61 +0.1 643,663 - -0.4 643,694 - -0.4 643,753 + +0.1 643,850 - HSERO_RS02930 0.19 +0.7 643,853 + HSERO_RS02930 0.20 +0.6 643,970 + HSERO_RS02930 0.42 +0.0 644,155 + HSERO_RS02930 0.77 +1.2 644,214 + HSERO_RS02930 0.88 -0.9 644,222 - HSERO_RS02930 0.90 +1.2 644,270 + -0.2 644,278 - -0.8 644,278 - -0.5 644,914 - HSERO_RS02935 0.36 +2.1 644,926 + HSERO_RS02935 0.37 +0.3 644,936 + HSERO_RS02935 0.38 -0.9 644,936 + HSERO_RS02935 0.38 +0.9 645,037 - HSERO_RS02935 0.49 -0.2 645,043 - HSERO_RS02935 0.50 -1.0 645,080 - HSERO_RS02935 0.54 -1.1 645,080 - HSERO_RS02935 0.54 -0.5 645,218 - HSERO_RS02935 0.70 -0.3
Or see this region's nucleotide sequence