Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02440 and HSERO_RS02445 are separated by 98 nucleotides HSERO_RS02445 and HSERO_RS02450 are separated by 45 nucleotides HSERO_RS02450 and HSERO_RS02455 are separated by 284 nucleotides
HSERO_RS02440: HSERO_RS02440 - TetR family transcriptional regulator, at 534,412 to 535,041
_RS02440
HSERO_RS02445: HSERO_RS02445 - proteinase inhibitor, at 535,140 to 535,436
_RS02445
HSERO_RS02450: HSERO_RS02450 - arsenate reductase, at 535,482 to 535,835
_RS02450
HSERO_RS02455: HSERO_RS02455 - UDP pyrophosphate phosphatase, at 536,120 to 536,974
_RS02455
Position (kb) 535
536 Strain fitness (log2 ratio) -2
-1
0
1 at 535.251 kb on + strand, within HSERO_RS02445 at 535.256 kb on + strand, within HSERO_RS02445 at 535.400 kb on - strand, within HSERO_RS02445 at 535.532 kb on + strand, within HSERO_RS02450 at 535.662 kb on - strand, within HSERO_RS02450 at 535.849 kb on - strand at 535.949 kb on + strand at 535.983 kb on + strand at 535.983 kb on + strand at 536.174 kb on + strand at 536.241 kb on + strand, within HSERO_RS02455 at 536.241 kb on + strand, within HSERO_RS02455 at 536.241 kb on + strand, within HSERO_RS02455 at 536.313 kb on + strand, within HSERO_RS02455 at 536.420 kb on + strand, within HSERO_RS02455 at 536.539 kb on - strand, within HSERO_RS02455 at 536.615 kb on + strand, within HSERO_RS02455 at 536.615 kb on + strand, within HSERO_RS02455 at 536.623 kb on - strand, within HSERO_RS02455 at 536.810 kb on + strand, within HSERO_RS02455
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 535,251 + HSERO_RS02445 0.37 -2.6 535,256 + HSERO_RS02445 0.39 -0.7 535,400 - HSERO_RS02445 0.88 -0.3 535,532 + HSERO_RS02450 0.14 -1.0 535,662 - HSERO_RS02450 0.51 -1.1 535,849 - +0.1 535,949 + -0.2 535,983 + +0.6 535,983 + -2.2 536,174 + -2.1 536,241 + HSERO_RS02455 0.14 +0.4 536,241 + HSERO_RS02455 0.14 -0.4 536,241 + HSERO_RS02455 0.14 -0.1 536,313 + HSERO_RS02455 0.23 -0.2 536,420 + HSERO_RS02455 0.35 -0.5 536,539 - HSERO_RS02455 0.49 -0.3 536,615 + HSERO_RS02455 0.58 +0.6 536,615 + HSERO_RS02455 0.58 -0.2 536,623 - HSERO_RS02455 0.59 +0.9 536,810 + HSERO_RS02455 0.81 +0.6
Or see this region's nucleotide sequence