Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS02180

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
474,898	+				+0.0
474,993	-		HSERO_RS02175	0.20	+0.6
475,173	-		HSERO_RS02175	0.41	+0.1
475,264	-		HSERO_RS02175	0.52	+0.8
475,741	+				+0.5
475,749	-				+0.1
475,749	-				-0.3
476,075	-		HSERO_RS02180	0.36	+0.8
476,098	+				+0.3
476,098	+		HSERO_RS02180	0.39	+0.7
476,125	-		HSERO_RS02180	0.42	-1.1
476,420	-		HSERO_RS02180	0.75	-1.9
476,470	-		HSERO_RS02180	0.80	+0.2
476,470	-		HSERO_RS02180	0.80	+1.3
476,667	-				-1.5