Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01935 and HSERO_RS01940 are separated by 96 nucleotides HSERO_RS01940 and HSERO_RS01945 overlap by 1 nucleotides HSERO_RS01945 and HSERO_RS01950 are separated by 40 nucleotides
HSERO_RS01935: HSERO_RS01935 - 3-dehydroquinate dehydratase, at 425,391 to 425,828
_RS01935
HSERO_RS01940: HSERO_RS01940 - thioredoxin, at 425,925 to 426,446
_RS01940
HSERO_RS01945: HSERO_RS01945 - hypothetical protein, at 426,446 to 427,087
_RS01945
HSERO_RS01950: HSERO_RS01950 - transcription regulator protein, at 427,128 to 428,165
_RS01950
Position (kb) 426
427
428 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 425.456 kb on - strand, within HSERO_RS01935 at 425.573 kb on - strand, within HSERO_RS01935 at 425.779 kb on - strand, within HSERO_RS01935 at 426.490 kb on - strand at 426.647 kb on - strand, within HSERO_RS01945 at 426.756 kb on - strand, within HSERO_RS01945 at 426.977 kb on - strand, within HSERO_RS01945 at 426.994 kb on - strand, within HSERO_RS01945 at 427.080 kb on + strand at 427.080 kb on + strand at 427.085 kb on + strand at 427.093 kb on - strand at 427.116 kb on + strand at 427.158 kb on + strand at 427.161 kb on - strand at 427.169 kb on + strand at 427.201 kb on - strand at 427.222 kb on - strand at 427.355 kb on + strand, within HSERO_RS01950 at 427.407 kb on - strand, within HSERO_RS01950 at 427.561 kb on + strand, within HSERO_RS01950 at 427.607 kb on - strand, within HSERO_RS01950 at 427.721 kb on + strand, within HSERO_RS01950 at 427.772 kb on + strand, within HSERO_RS01950 at 427.795 kb on + strand, within HSERO_RS01950 at 427.847 kb on - strand, within HSERO_RS01950 at 427.906 kb on + strand, within HSERO_RS01950 at 427.907 kb on - strand, within HSERO_RS01950 at 427.914 kb on - strand, within HSERO_RS01950 at 427.920 kb on + strand, within HSERO_RS01950 at 427.931 kb on + strand, within HSERO_RS01950 at 427.939 kb on - strand, within HSERO_RS01950 at 427.958 kb on + strand, within HSERO_RS01950 at 427.984 kb on - strand, within HSERO_RS01950 at 428.000 kb on - strand, within HSERO_RS01950 at 428.072 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 425,456 - HSERO_RS01935 0.15 -0.7 425,573 - HSERO_RS01935 0.42 -0.8 425,779 - HSERO_RS01935 0.89 -1.4 426,490 - -0.2 426,647 - HSERO_RS01945 0.31 +0.5 426,756 - HSERO_RS01945 0.48 +0.5 426,977 - HSERO_RS01945 0.83 +0.1 426,994 - HSERO_RS01945 0.85 +0.9 427,080 + -3.8 427,080 + -0.3 427,085 + -0.9 427,093 - -0.8 427,116 + +0.1 427,158 + +0.4 427,161 - -0.3 427,169 + +1.0 427,201 - -1.4 427,222 - -0.3 427,355 + HSERO_RS01950 0.22 +0.4 427,407 - HSERO_RS01950 0.27 +0.8 427,561 + HSERO_RS01950 0.42 -1.0 427,607 - HSERO_RS01950 0.46 +0.0 427,721 + HSERO_RS01950 0.57 -0.3 427,772 + HSERO_RS01950 0.62 -1.4 427,795 + HSERO_RS01950 0.64 -0.1 427,847 - HSERO_RS01950 0.69 +0.2 427,906 + HSERO_RS01950 0.75 -0.8 427,907 - HSERO_RS01950 0.75 -0.9 427,914 - HSERO_RS01950 0.76 +0.8 427,920 + HSERO_RS01950 0.76 +0.3 427,931 + HSERO_RS01950 0.77 -0.2 427,939 - HSERO_RS01950 0.78 -0.2 427,958 + HSERO_RS01950 0.80 -0.5 427,984 - HSERO_RS01950 0.82 -0.3 428,000 - HSERO_RS01950 0.84 -0.3 428,072 + -0.4
Or see this region's nucleotide sequence