Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01910 and HSERO_RS01915 are separated by 100 nucleotides HSERO_RS01915 and HSERO_RS01920 are separated by 3 nucleotides HSERO_RS01920 and HSERO_RS01925 are separated by 41 nucleotides
HSERO_RS01910: HSERO_RS01910 - sugar kinase, at 420,023 to 420,958
_RS01910
HSERO_RS01915: HSERO_RS01915 - membrane protein, at 421,059 to 422,348
_RS01915
HSERO_RS01920: HSERO_RS01920 - 50S ribosomal protein L11 methyltransferase, at 422,352 to 423,266
_RS01920
HSERO_RS01925: HSERO_RS01925 - acetyl-CoA carboxylase biotin carboxylase subunit, at 423,308 to 424,687
_RS01925
Position (kb) 421
422
423 Strain fitness (log2 ratio) -1
0
1 at 421.019 kb on + strand at 421.036 kb on - strand at 421.051 kb on + strand at 421.094 kb on - strand at 421.243 kb on + strand, within HSERO_RS01915 at 421.411 kb on + strand, within HSERO_RS01915 at 421.555 kb on - strand, within HSERO_RS01915 at 421.627 kb on - strand, within HSERO_RS01915 at 421.807 kb on - strand at 422.168 kb on - strand, within HSERO_RS01915 at 422.303 kb on + strand at 422.413 kb on - strand at 422.510 kb on + strand, within HSERO_RS01920 at 422.518 kb on - strand, within HSERO_RS01920 at 422.609 kb on + strand, within HSERO_RS01920 at 422.751 kb on + strand, within HSERO_RS01920 at 422.972 kb on - strand, within HSERO_RS01920 at 423.001 kb on + strand, within HSERO_RS01920 at 423.014 kb on - strand, within HSERO_RS01920
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 421,019 + +0.2 421,036 - -0.2 421,051 + -0.4 421,094 - +1.0 421,243 + HSERO_RS01915 0.14 +0.0 421,411 + HSERO_RS01915 0.27 +0.5 421,555 - HSERO_RS01915 0.38 +0.7 421,627 - HSERO_RS01915 0.44 +0.3 421,807 - +0.3 422,168 - HSERO_RS01915 0.86 +0.9 422,303 + +0.2 422,413 - -0.4 422,510 + HSERO_RS01920 0.17 +0.0 422,518 - HSERO_RS01920 0.18 +0.6 422,609 + HSERO_RS01920 0.28 +0.4 422,751 + HSERO_RS01920 0.44 +0.6 422,972 - HSERO_RS01920 0.68 +0.6 423,001 + HSERO_RS01920 0.71 +0.2 423,014 - HSERO_RS01920 0.72 +0.7
Or see this region's nucleotide sequence