Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01445 and HSERO_RS01450 overlap by 1 nucleotides HSERO_RS01450 and HSERO_RS01455 are separated by 205 nucleotides HSERO_RS01455 and HSERO_RS01460 are separated by 289 nucleotides HSERO_RS01460 and HSERO_RS01465 are separated by 133 nucleotides
HSERO_RS01445: HSERO_RS01445 - biopolymer transporter TonB, at 313,202 to 313,912
_RS01445
HSERO_RS01450: HSERO_RS01450 - biopolymer transporter ExbD, at 313,912 to 314,319
_RS01450
HSERO_RS01455: HSERO_RS01455 - hypothetical protein, at 314,525 to 315,103
_RS01455
HSERO_RS01460: HSERO_RS01460 - transcriptional regulator, at 315,393 to 315,749
_RS01460
HSERO_RS01465: HSERO_RS01465 - CDP-diacylglycerol pyrophosphatase, at 315,883 to 316,647
_RS01465
Position (kb) 314
315
316 Strain fitness (log2 ratio) -2
-1
0
1 at 313.619 kb on + strand, within HSERO_RS01445 at 313.674 kb on + strand, within HSERO_RS01445 at 313.720 kb on + strand, within HSERO_RS01445 at 313.816 kb on + strand, within HSERO_RS01445 at 314.135 kb on + strand, within HSERO_RS01450 at 314.304 kb on + strand at 314.304 kb on + strand at 314.406 kb on + strand at 314.406 kb on + strand at 314.406 kb on + strand at 314.414 kb on - strand at 314.421 kb on + strand at 314.426 kb on + strand at 314.675 kb on - strand, within HSERO_RS01455 at 314.836 kb on + strand, within HSERO_RS01455 at 315.131 kb on + strand at 315.215 kb on - strand at 315.657 kb on - strand, within HSERO_RS01460 at 315.798 kb on + strand at 315.860 kb on + strand at 315.899 kb on - strand at 316.058 kb on - strand, within HSERO_RS01465
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 313,619 + HSERO_RS01445 0.59 +0.6 313,674 + HSERO_RS01445 0.66 -2.7 313,720 + HSERO_RS01445 0.73 +0.5 313,816 + HSERO_RS01445 0.86 +0.2 314,135 + HSERO_RS01450 0.55 +0.7 314,304 + +1.6 314,304 + -0.3 314,406 + +0.6 314,406 + -1.6 314,406 + +0.2 314,414 - +0.2 314,421 + -0.1 314,426 + +0.6 314,675 - HSERO_RS01455 0.26 +1.1 314,836 + HSERO_RS01455 0.54 +1.2 315,131 + -0.9 315,215 - +0.4 315,657 - HSERO_RS01460 0.74 +0.5 315,798 + +0.2 315,860 + -0.3 315,899 - +0.1 316,058 - HSERO_RS01465 0.23 -0.7
Or see this region's nucleotide sequence