Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01155 and HSERO_RS01160 are separated by 118 nucleotides HSERO_RS01160 and HSERO_RS01165 are separated by 50 nucleotides HSERO_RS01165 and HSERO_RS01170 are separated by 54 nucleotides
HSERO_RS01155: HSERO_RS01155 - peptidase M38, at 239,705 to 240,934
_RS01155
HSERO_RS01160: HSERO_RS01160 - LysR family transcriptional regulator, at 241,053 to 241,958
_RS01160
HSERO_RS01165: HSERO_RS01165 - dihydroneopterin triphosphate pyrophosphatase, at 242,009 to 242,512
_RS01165
HSERO_RS01170: HSERO_RS01170 - metal-dependent hydrolase, at 242,567 to 243,364
_RS01170
Position (kb) 241
242 Strain fitness (log2 ratio) -2
-1
0
1 at 240.077 kb on - strand, within HSERO_RS01155 at 240.149 kb on + strand, within HSERO_RS01155 at 240.247 kb on - strand, within HSERO_RS01155 at 240.391 kb on + strand, within HSERO_RS01155 at 240.391 kb on + strand, within HSERO_RS01155 at 240.455 kb on + strand at 240.562 kb on - strand, within HSERO_RS01155 at 240.625 kb on + strand, within HSERO_RS01155 at 240.741 kb on + strand, within HSERO_RS01155 at 241.093 kb on + strand at 241.347 kb on - strand, within HSERO_RS01160 at 241.368 kb on + strand, within HSERO_RS01160 at 241.592 kb on + strand, within HSERO_RS01160 at 241.758 kb on + strand, within HSERO_RS01160 at 241.781 kb on - strand, within HSERO_RS01160 at 241.945 kb on - strand at 242.026 kb on - strand at 242.117 kb on - strand, within HSERO_RS01165 at 242.142 kb on + strand, within HSERO_RS01165 at 242.145 kb on - strand, within HSERO_RS01165 at 242.216 kb on + strand, within HSERO_RS01165 at 242.216 kb on + strand, within HSERO_RS01165 at 242.247 kb on - strand, within HSERO_RS01165 at 242.346 kb on - strand, within HSERO_RS01165 at 242.534 kb on + strand at 242.611 kb on - strand at 242.611 kb on - strand at 242.693 kb on + strand, within HSERO_RS01170 at 242.701 kb on - strand, within HSERO_RS01170 at 242.729 kb on + strand, within HSERO_RS01170 at 242.937 kb on + strand, within HSERO_RS01170
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 240,077 - HSERO_RS01155 0.30 +0.9 240,149 + HSERO_RS01155 0.36 -1.7 240,247 - HSERO_RS01155 0.44 +0.4 240,391 + HSERO_RS01155 0.56 -0.6 240,391 + HSERO_RS01155 0.56 -0.7 240,455 + +1.5 240,562 - HSERO_RS01155 0.70 -0.1 240,625 + HSERO_RS01155 0.75 -0.1 240,741 + HSERO_RS01155 0.84 -0.7 241,093 + +1.2 241,347 - HSERO_RS01160 0.32 +1.3 241,368 + HSERO_RS01160 0.35 +1.2 241,592 + HSERO_RS01160 0.59 -0.0 241,758 + HSERO_RS01160 0.78 +0.1 241,781 - HSERO_RS01160 0.80 -0.1 241,945 - -0.2 242,026 - +0.0 242,117 - HSERO_RS01165 0.21 -0.7 242,142 + HSERO_RS01165 0.26 -0.1 242,145 - HSERO_RS01165 0.27 +0.2 242,216 + HSERO_RS01165 0.41 -1.1 242,216 + HSERO_RS01165 0.41 -0.9 242,247 - HSERO_RS01165 0.47 +0.9 242,346 - HSERO_RS01165 0.67 +1.0 242,534 + +1.4 242,611 - -0.4 242,611 - -0.1 242,693 + HSERO_RS01170 0.16 -0.2 242,701 - HSERO_RS01170 0.17 -2.3 242,729 + HSERO_RS01170 0.20 -0.0 242,937 + HSERO_RS01170 0.46 -0.4
Or see this region's nucleotide sequence