Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS00450

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
104,335	+		HSERO_RS00445	0.75	+0.1
104,460	-				+0.6
104,529	+				-1.8
104,607	-				-0.3
104,626	+				-0.3
105,086	-		HSERO_RS00450	0.24	+0.2
105,305	-		HSERO_RS00450	0.36	-0.1
105,305	-		HSERO_RS00450	0.36	+0.9
105,398	+		HSERO_RS00450	0.41	+1.3
105,551	+		HSERO_RS00450	0.50	+0.3
105,620	+		HSERO_RS00450	0.54	-0.1
105,679	-		HSERO_RS00450	0.57	+0.2
106,578	-				-0.4
106,712	+				-0.7
106,717	+				-0.7
106,720	-				-0.2
106,729	+				-2.3
106,756	-				-0.4
106,784	-				-1.2
106,828	-				-3.0
106,881	+		HSERO_RS00455	0.11	-0.8
106,889	-		HSERO_RS00455	0.12	-0.7
106,896	+		HSERO_RS00455	0.12	+0.7
106,901	+		HSERO_RS00455	0.13	-1.1
106,908	+		HSERO_RS00455	0.13	-1.9
107,056	-		HSERO_RS00455	0.26	-0.3
107,148	+		HSERO_RS00455	0.34	-1.0
107,296	+		HSERO_RS00455	0.47	-0.5