Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00430 and HSERO_RS00435 are separated by 38 nucleotides HSERO_RS00435 and HSERO_RS00440 are separated by 26 nucleotides HSERO_RS00440 and HSERO_RS00445 are separated by 53 nucleotides
HSERO_RS00430: HSERO_RS00430 - glutamate--cysteine ligase, at 101,286 to 102,587
_RS00430
HSERO_RS00435: HSERO_RS00435 - glutathione synthetase, at 102,626 to 103,576
_RS00435
HSERO_RS00440: HSERO_RS00440 - PTS fructose transporter subunit IIA, at 103,603 to 104,079
_RS00440
HSERO_RS00445: HSERO_RS00445 - phosphocarrier protein HPr, at 104,133 to 104,402
_RS00445
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 101.739 kb on - strand, within HSERO_RS00430 at 101.773 kb on + strand, within HSERO_RS00430 at 102.126 kb on + strand, within HSERO_RS00430 at 102.256 kb on + strand, within HSERO_RS00430 at 102.559 kb on + strand at 102.608 kb on + strand at 102.613 kb on - strand at 102.615 kb on + strand at 102.616 kb on - strand at 102.661 kb on + strand at 102.843 kb on + strand, within HSERO_RS00435 at 102.843 kb on + strand, within HSERO_RS00435 at 103.248 kb on + strand, within HSERO_RS00435 at 103.249 kb on - strand, within HSERO_RS00435 at 103.455 kb on + strand, within HSERO_RS00435 at 103.580 kb on - strand at 103.605 kb on + strand at 104.335 kb on + strand, within HSERO_RS00445 at 104.460 kb on - strand at 104.529 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 101,739 - HSERO_RS00430 0.35 -1.8 101,773 + HSERO_RS00430 0.37 +1.7 102,126 + HSERO_RS00430 0.65 +1.1 102,256 + HSERO_RS00430 0.75 -1.5 102,559 + -0.1 102,608 + -0.1 102,613 - -0.0 102,615 + -0.4 102,616 - -0.4 102,661 + -0.1 102,843 + HSERO_RS00435 0.23 -0.3 102,843 + HSERO_RS00435 0.23 -0.6 103,248 + HSERO_RS00435 0.65 -0.2 103,249 - HSERO_RS00435 0.66 -2.9 103,455 + HSERO_RS00435 0.87 -0.7 103,580 - -0.9 103,605 + -0.4 104,335 + HSERO_RS00445 0.75 +0.1 104,460 - +0.6 104,529 + -1.8
Or see this region's nucleotide sequence