Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27390

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27380 and BWI76_RS27385 are separated by 124 nucleotidesBWI76_RS27385 and BWI76_RS27390 are separated by 65 nucleotidesBWI76_RS27390 and BWI76_RS27395 are separated by 123 nucleotides BWI76_RS27380: BWI76_RS27380 - nucleoid occlusion factor SlmA, at 5,681,678 to 5,682,274 _RS27380 BWI76_RS27385: BWI76_RS27385 - orotate phosphoribosyltransferase, at 5,682,399 to 5,683,040 _RS27385 BWI76_RS27390: BWI76_RS27390 - ribonuclease PH, at 5,683,106 to 5,683,822 _RS27390 BWI76_RS27395: BWI76_RS27395 - hypothetical protein, at 5,683,946 to 5,684,809 _RS27395 Position (kb) 5683 5684Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 5682.119 kb on + strand, within BWI76_RS27380at 5682.161 kb on + strand, within BWI76_RS27380at 5682.193 kb on - strand, within BWI76_RS27380at 5682.350 kb on + strandat 5682.357 kb on + strandat 5682.423 kb on + strandat 5682.695 kb on - strand, within BWI76_RS27385at 5682.695 kb on - strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.916 kb on + strand, within BWI76_RS27385at 5682.924 kb on - strand, within BWI76_RS27385at 5682.924 kb on - strand, within BWI76_RS27385at 5682.924 kb on - strand, within BWI76_RS27385at 5683.011 kb on + strandat 5683.056 kb on - strandat 5683.142 kb on + strandat 5683.155 kb on + strandat 5683.194 kb on - strand, within BWI76_RS27390at 5683.328 kb on + strand, within BWI76_RS27390at 5683.468 kb on + strand, within BWI76_RS27390at 5683.607 kb on + strand, within BWI76_RS27390at 5683.652 kb on + strand, within BWI76_RS27390at 5683.655 kb on - strand, within BWI76_RS27390at 5683.719 kb on - strand, within BWI76_RS27390at 5683.738 kb on + strand, within BWI76_RS27390at 5683.772 kb on + strandat 5683.772 kb on + strandat 5683.780 kb on - strandat 5683.780 kb on - strandat 5683.798 kb on - strandat 5683.905 kb on + strandat 5683.913 kb on - strandat 5683.941 kb on + strandat 5683.941 kb on + strandat 5684.004 kb on - strandat 5684.106 kb on + strand, within BWI76_RS27395at 5684.170 kb on + strand, within BWI76_RS27395at 5684.178 kb on - strand, within BWI76_RS27395at 5684.544 kb on + strand, within BWI76_RS27395at 5684.565 kb on + strand, within BWI76_RS27395

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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5,682,119 + BWI76_RS27380 0.74 +0.1
5,682,161 + BWI76_RS27380 0.81 -0.3
5,682,193 - BWI76_RS27380 0.86 -0.5
5,682,350 + -0.3
5,682,357 + +0.3
5,682,423 + -1.0
5,682,695 - BWI76_RS27385 0.46 -2.2
5,682,695 - BWI76_RS27385 0.46 +0.1
5,682,916 + BWI76_RS27385 0.81 +0.3
5,682,916 + BWI76_RS27385 0.81 -1.3
5,682,916 + BWI76_RS27385 0.81 -2.1
5,682,916 + BWI76_RS27385 0.81 +1.5
5,682,916 + BWI76_RS27385 0.81 +0.1
5,682,916 + BWI76_RS27385 0.81 +0.6
5,682,916 + BWI76_RS27385 0.81 -0.4
5,682,924 - BWI76_RS27385 0.82 +0.7
5,682,924 - BWI76_RS27385 0.82 +1.1
5,682,924 - BWI76_RS27385 0.82 -1.0
5,683,011 + -2.1
5,683,056 - -0.8
5,683,142 + +1.3
5,683,155 + +2.1
5,683,194 - BWI76_RS27390 0.12 +1.7
5,683,328 + BWI76_RS27390 0.31 +2.2
5,683,468 + BWI76_RS27390 0.50 +1.7
5,683,607 + BWI76_RS27390 0.70 +2.3
5,683,652 + BWI76_RS27390 0.76 +1.3
5,683,655 - BWI76_RS27390 0.77 +3.3
5,683,719 - BWI76_RS27390 0.85 +0.9
5,683,738 + BWI76_RS27390 0.88 +1.4
5,683,772 + +3.4
5,683,772 + -1.8
5,683,780 - +2.5
5,683,780 - +2.5
5,683,798 - -1.5
5,683,905 + -0.9
5,683,913 - -3.2
5,683,941 + -1.0
5,683,941 + -2.2
5,684,004 - +0.3
5,684,106 + BWI76_RS27395 0.19 -1.9
5,684,170 + BWI76_RS27395 0.26 -0.7
5,684,178 - BWI76_RS27395 0.27 -0.5
5,684,544 + BWI76_RS27395 0.69 -0.2
5,684,565 + BWI76_RS27395 0.72 -1.9

Or see this region's nucleotide sequence