Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26080

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26070 and BWI76_RS26075 are separated by 17 nucleotidesBWI76_RS26075 and BWI76_RS26080 are separated by 78 nucleotidesBWI76_RS26080 and BWI76_RS26085 are separated by 84 nucleotides BWI76_RS26070: BWI76_RS26070 - ribulose-phosphate 3-epimerase, at 5,387,179 to 5,387,856 _RS26070 BWI76_RS26075: BWI76_RS26075 - DNA adenine methylase, at 5,387,874 to 5,388,701 _RS26075 BWI76_RS26080: BWI76_RS26080 - cell division protein DamX, at 5,388,780 to 5,390,093 _RS26080 BWI76_RS26085: BWI76_RS26085 - 3-dehydroquinate synthase, at 5,390,178 to 5,391,272 _RS26085 Position (kb) 5388 5389 5390 5391Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7at 5387.903 kb on - strandat 5388.260 kb on + strand, within BWI76_RS26075at 5388.314 kb on - strand, within BWI76_RS26075at 5388.314 kb on - strand, within BWI76_RS26075at 5388.432 kb on - strand, within BWI76_RS26075at 5388.454 kb on + strand, within BWI76_RS26075at 5388.513 kb on + strand, within BWI76_RS26075at 5388.557 kb on - strand, within BWI76_RS26075at 5388.805 kb on - strandat 5388.873 kb on - strandat 5388.908 kb on - strandat 5388.910 kb on + strandat 5388.910 kb on + strandat 5388.944 kb on - strand, within BWI76_RS26080at 5388.997 kb on - strand, within BWI76_RS26080at 5389.031 kb on - strand, within BWI76_RS26080at 5389.035 kb on - strand, within BWI76_RS26080at 5389.045 kb on - strand, within BWI76_RS26080at 5389.045 kb on - strand, within BWI76_RS26080at 5389.503 kb on + strand, within BWI76_RS26080at 5389.535 kb on - strand, within BWI76_RS26080at 5389.670 kb on + strand, within BWI76_RS26080at 5389.675 kb on + strand, within BWI76_RS26080at 5390.224 kb on - strandat 5390.276 kb on - strandat 5390.276 kb on - strandat 5390.737 kb on - strand, within BWI76_RS26085at 5391.051 kb on - strand, within BWI76_RS26085

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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5,387,903 - -1.3
5,388,260 + BWI76_RS26075 0.47 +3.7
5,388,314 - BWI76_RS26075 0.53 +1.3
5,388,314 - BWI76_RS26075 0.53 +3.2
5,388,432 - BWI76_RS26075 0.67 +3.6
5,388,454 + BWI76_RS26075 0.70 +0.2
5,388,513 + BWI76_RS26075 0.77 +3.3
5,388,557 - BWI76_RS26075 0.82 +1.8
5,388,805 - +2.2
5,388,873 - +1.1
5,388,908 - +1.9
5,388,910 + +3.9
5,388,910 + +4.0
5,388,944 - BWI76_RS26080 0.12 +1.9
5,388,997 - BWI76_RS26080 0.17 +1.7
5,389,031 - BWI76_RS26080 0.19 +1.1
5,389,035 - BWI76_RS26080 0.19 +0.3
5,389,045 - BWI76_RS26080 0.20 +1.9
5,389,045 - BWI76_RS26080 0.20 +1.6
5,389,503 + BWI76_RS26080 0.55 +2.3
5,389,535 - BWI76_RS26080 0.57 +2.7
5,389,670 + BWI76_RS26080 0.68 +2.5
5,389,675 + BWI76_RS26080 0.68 +3.2
5,390,224 - +2.7
5,390,276 - +3.6
5,390,276 - +3.7
5,390,737 - BWI76_RS26085 0.51 +6.2
5,391,051 - BWI76_RS26085 0.80 +6.9

Or see this region's nucleotide sequence