Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25045 and BWI76_RS25050 are separated by 98 nucleotides BWI76_RS25050 and BWI76_RS25055 are separated by 144 nucleotides
BWI76_RS25045: BWI76_RS25045 - Malonate utilization transacting regulator MdcR, at 5,212,890 to 5,213,831
_RS25045
BWI76_RS25050: BWI76_RS25050 - tryptophan permease, at 5,213,930 to 5,215,174
_RS25050
BWI76_RS25055: BWI76_RS25055 - DEAD/DEAH family ATP-dependent RNA helicase, at 5,215,319 to 5,217,280
_RS25055
Position (kb) 5213
5214
5215
5216 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5212.943 kb on - strand at 5212.965 kb on + strand at 5212.970 kb on - strand at 5212.970 kb on - strand at 5213.026 kb on - strand, within BWI76_RS25045 at 5213.040 kb on - strand, within BWI76_RS25045 at 5213.051 kb on + strand, within BWI76_RS25045 at 5213.059 kb on - strand at 5213.059 kb on - strand, within BWI76_RS25045 at 5213.059 kb on - strand, within BWI76_RS25045 at 5213.067 kb on - strand, within BWI76_RS25045 at 5213.070 kb on - strand, within BWI76_RS25045 at 5213.070 kb on - strand, within BWI76_RS25045 at 5213.072 kb on - strand, within BWI76_RS25045 at 5213.097 kb on + strand, within BWI76_RS25045 at 5213.097 kb on + strand, within BWI76_RS25045 at 5213.097 kb on + strand, within BWI76_RS25045 at 5213.097 kb on + strand, within BWI76_RS25045 at 5213.097 kb on + strand, within BWI76_RS25045 at 5213.098 kb on + strand, within BWI76_RS25045 at 5213.098 kb on + strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.105 kb on - strand, within BWI76_RS25045 at 5213.120 kb on - strand, within BWI76_RS25045 at 5213.122 kb on + strand, within BWI76_RS25045 at 5213.125 kb on - strand, within BWI76_RS25045 at 5213.130 kb on - strand, within BWI76_RS25045 at 5213.164 kb on - strand, within BWI76_RS25045 at 5213.164 kb on - strand, within BWI76_RS25045 at 5213.164 kb on - strand, within BWI76_RS25045 at 5213.164 kb on - strand, within BWI76_RS25045 at 5213.164 kb on - strand, within BWI76_RS25045 at 5213.195 kb on + strand, within BWI76_RS25045 at 5213.195 kb on + strand, within BWI76_RS25045 at 5213.195 kb on + strand, within BWI76_RS25045 at 5213.195 kb on + strand, within BWI76_RS25045 at 5213.203 kb on - strand, within BWI76_RS25045 at 5213.203 kb on - strand, within BWI76_RS25045 at 5213.203 kb on - strand, within BWI76_RS25045 at 5213.203 kb on - strand, within BWI76_RS25045 at 5213.209 kb on - strand, within BWI76_RS25045 at 5213.209 kb on - strand, within BWI76_RS25045 at 5213.220 kb on + strand, within BWI76_RS25045 at 5213.220 kb on + strand, within BWI76_RS25045 at 5213.220 kb on - strand, within BWI76_RS25045 at 5213.228 kb on - strand, within BWI76_RS25045 at 5213.228 kb on - strand, within BWI76_RS25045 at 5213.228 kb on - strand, within BWI76_RS25045 at 5213.229 kb on - strand, within BWI76_RS25045 at 5213.233 kb on + strand, within BWI76_RS25045 at 5213.267 kb on - strand, within BWI76_RS25045 at 5213.272 kb on - strand, within BWI76_RS25045 at 5213.275 kb on + strand, within BWI76_RS25045 at 5213.275 kb on + strand, within BWI76_RS25045 at 5213.275 kb on + strand, within BWI76_RS25045 at 5213.275 kb on - strand, within BWI76_RS25045 at 5213.283 kb on + strand, within BWI76_RS25045 at 5213.284 kb on - strand, within BWI76_RS25045 at 5213.288 kb on + strand, within BWI76_RS25045 at 5213.291 kb on - strand, within BWI76_RS25045 at 5213.298 kb on + strand, within BWI76_RS25045 at 5213.306 kb on + strand at 5213.306 kb on - strand, within BWI76_RS25045 at 5213.306 kb on - strand, within BWI76_RS25045 at 5213.314 kb on - strand, within BWI76_RS25045 at 5213.314 kb on - strand, within BWI76_RS25045 at 5213.372 kb on - strand, within BWI76_RS25045 at 5213.374 kb on + strand, within BWI76_RS25045 at 5213.459 kb on + strand, within BWI76_RS25045 at 5213.459 kb on + strand, within BWI76_RS25045 at 5213.467 kb on - strand at 5213.467 kb on - strand, within BWI76_RS25045 at 5213.467 kb on - strand, within BWI76_RS25045 at 5213.467 kb on - strand, within BWI76_RS25045 at 5213.467 kb on - strand, within BWI76_RS25045 at 5213.503 kb on + strand, within BWI76_RS25045 at 5213.523 kb on + strand, within BWI76_RS25045 at 5213.536 kb on + strand, within BWI76_RS25045 at 5213.548 kb on + strand, within BWI76_RS25045 at 5213.604 kb on - strand, within BWI76_RS25045 at 5213.630 kb on + strand, within BWI76_RS25045 at 5213.638 kb on - strand at 5213.675 kb on + strand, within BWI76_RS25045 at 5213.675 kb on + strand, within BWI76_RS25045 at 5213.717 kb on + strand, within BWI76_RS25045 at 5213.774 kb on + strand at 5213.777 kb on + strand at 5213.777 kb on + strand at 5213.777 kb on + strand at 5213.782 kb on - strand at 5213.785 kb on - strand at 5213.810 kb on + strand at 5213.942 kb on + strand at 5213.950 kb on + strand at 5213.950 kb on - strand at 5213.958 kb on - strand at 5213.974 kb on - strand at 5213.979 kb on + strand at 5213.984 kb on + strand at 5213.984 kb on + strand at 5213.987 kb on - strand at 5213.987 kb on - strand at 5213.992 kb on - strand at 5213.992 kb on - strand at 5213.992 kb on - strand at 5213.992 kb on - strand at 5213.992 kb on - strand at 5213.997 kb on - strand at 5213.997 kb on - strand at 5214.002 kb on + strand at 5214.004 kb on - strand at 5214.004 kb on - strand at 5214.010 kb on - strand at 5214.010 kb on - strand at 5214.033 kb on + strand at 5214.040 kb on + strand at 5214.058 kb on - strand, within BWI76_RS25050 at 5214.176 kb on - strand, within BWI76_RS25050 at 5214.189 kb on - strand, within BWI76_RS25050 at 5214.280 kb on + strand, within BWI76_RS25050 at 5214.333 kb on - strand, within BWI76_RS25050 at 5214.349 kb on - strand, within BWI76_RS25050 at 5214.423 kb on + strand, within BWI76_RS25050 at 5214.590 kb on - strand, within BWI76_RS25050 at 5214.627 kb on + strand, within BWI76_RS25050 at 5214.784 kb on + strand, within BWI76_RS25050 at 5214.822 kb on + strand, within BWI76_RS25050 at 5214.830 kb on + strand, within BWI76_RS25050 at 5214.895 kb on - strand, within BWI76_RS25050 at 5214.908 kb on - strand, within BWI76_RS25050 at 5214.918 kb on - strand, within BWI76_RS25050 at 5215.093 kb on - strand at 5215.128 kb on + strand at 5215.497 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 5,212,943 - -0.3 5,212,965 + +0.2 5,212,970 - +1.3 5,212,970 - +0.8 5,213,026 - BWI76_RS25045 0.14 +0.6 5,213,040 - BWI76_RS25045 0.16 -2.4 5,213,051 + BWI76_RS25045 0.17 +0.3 5,213,059 - -0.5 5,213,059 - BWI76_RS25045 0.18 +1.0 5,213,059 - BWI76_RS25045 0.18 -0.8 5,213,067 - BWI76_RS25045 0.19 -2.2 5,213,070 - BWI76_RS25045 0.19 -1.0 5,213,070 - BWI76_RS25045 0.19 +0.8 5,213,072 - BWI76_RS25045 0.19 -0.9 5,213,097 + BWI76_RS25045 0.22 -0.9 5,213,097 + BWI76_RS25045 0.22 -0.3 5,213,097 + BWI76_RS25045 0.22 -2.2 5,213,097 + BWI76_RS25045 0.22 -2.2 5,213,097 + BWI76_RS25045 0.22 +2.1 5,213,098 + BWI76_RS25045 0.22 -0.2 5,213,098 + BWI76_RS25045 0.22 -0.5 5,213,105 - BWI76_RS25045 0.23 -0.6 5,213,105 - BWI76_RS25045 0.23 -0.7 5,213,105 - BWI76_RS25045 0.23 -0.1 5,213,105 - BWI76_RS25045 0.23 +0.2 5,213,105 - BWI76_RS25045 0.23 +1.2 5,213,105 - BWI76_RS25045 0.23 -1.8 5,213,105 - BWI76_RS25045 0.23 +0.4 5,213,105 - BWI76_RS25045 0.23 -0.3 5,213,105 - BWI76_RS25045 0.23 -0.9 5,213,105 - BWI76_RS25045 0.23 +0.0 5,213,105 - BWI76_RS25045 0.23 +0.2 5,213,120 - BWI76_RS25045 0.24 -0.8 5,213,122 + BWI76_RS25045 0.25 -2.0 5,213,125 - BWI76_RS25045 0.25 +0.4 5,213,130 - BWI76_RS25045 0.25 +1.5 5,213,164 - BWI76_RS25045 0.29 +0.5 5,213,164 - BWI76_RS25045 0.29 -1.6 5,213,164 - BWI76_RS25045 0.29 -0.2 5,213,164 - BWI76_RS25045 0.29 -1.4 5,213,164 - BWI76_RS25045 0.29 -0.5 5,213,195 + BWI76_RS25045 0.32 +0.5 5,213,195 + BWI76_RS25045 0.32 -0.3 5,213,195 + BWI76_RS25045 0.32 +1.3 5,213,195 + BWI76_RS25045 0.32 +1.3 5,213,203 - BWI76_RS25045 0.33 +1.2 5,213,203 - BWI76_RS25045 0.33 -0.5 5,213,203 - BWI76_RS25045 0.33 +0.8 5,213,203 - BWI76_RS25045 0.33 -1.7 5,213,209 - BWI76_RS25045 0.34 -3.5 5,213,209 - BWI76_RS25045 0.34 +0.2 5,213,220 + BWI76_RS25045 0.35 +0.2 5,213,220 + BWI76_RS25045 0.35 +0.5 5,213,220 - BWI76_RS25045 0.35 +0.6 5,213,228 - BWI76_RS25045 0.36 -0.5 5,213,228 - BWI76_RS25045 0.36 -0.5 5,213,228 - BWI76_RS25045 0.36 +1.8 5,213,229 - BWI76_RS25045 0.36 +3.1 5,213,233 + BWI76_RS25045 0.36 +1.8 5,213,267 - BWI76_RS25045 0.40 -1.9 5,213,272 - BWI76_RS25045 0.41 -0.9 5,213,275 + BWI76_RS25045 0.41 -2.0 5,213,275 + BWI76_RS25045 0.41 -2.0 5,213,275 + BWI76_RS25045 0.41 +0.2 5,213,275 - BWI76_RS25045 0.41 -0.1 5,213,283 + BWI76_RS25045 0.42 -1.3 5,213,284 - BWI76_RS25045 0.42 -1.0 5,213,288 + BWI76_RS25045 0.42 +0.7 5,213,291 - BWI76_RS25045 0.43 -0.4 5,213,298 + BWI76_RS25045 0.43 -0.1 5,213,306 + +1.5 5,213,306 - BWI76_RS25045 0.44 -2.5 5,213,306 - BWI76_RS25045 0.44 +1.8 5,213,314 - BWI76_RS25045 0.45 +0.7 5,213,314 - BWI76_RS25045 0.45 +0.6 5,213,372 - BWI76_RS25045 0.51 -1.9 5,213,374 + BWI76_RS25045 0.51 +1.7 5,213,459 + BWI76_RS25045 0.60 -0.3 5,213,459 + BWI76_RS25045 0.60 +0.0 5,213,467 - -0.1 5,213,467 - BWI76_RS25045 0.61 -1.0 5,213,467 - BWI76_RS25045 0.61 -1.5 5,213,467 - BWI76_RS25045 0.61 -1.0 5,213,467 - BWI76_RS25045 0.61 -1.0 5,213,503 + BWI76_RS25045 0.65 +0.9 5,213,523 + BWI76_RS25045 0.67 -1.1 5,213,536 + BWI76_RS25045 0.69 -0.7 5,213,548 + BWI76_RS25045 0.70 +0.7 5,213,604 - BWI76_RS25045 0.76 +1.2 5,213,630 + BWI76_RS25045 0.79 -0.8 5,213,638 - +1.5 5,213,675 + BWI76_RS25045 0.83 -1.7 5,213,675 + BWI76_RS25045 0.83 +2.5 5,213,717 + BWI76_RS25045 0.88 -1.0 5,213,774 + +2.2 5,213,777 + -2.3 5,213,777 + -0.6 5,213,777 + -2.2 5,213,782 - +0.5 5,213,785 - -0.7 5,213,810 + -0.0 5,213,942 + -0.0 5,213,950 + -0.7 5,213,950 - -0.1 5,213,958 - +0.3 5,213,974 - +0.8 5,213,979 + +0.0 5,213,984 + -1.7 5,213,984 + -0.1 5,213,987 - -0.5 5,213,987 - -1.1 5,213,992 - -0.6 5,213,992 - +0.6 5,213,992 - +0.5 5,213,992 - -1.2 5,213,992 - -0.1 5,213,997 - -0.2 5,213,997 - +0.9 5,214,002 + -1.2 5,214,004 - +2.2 5,214,004 - -0.8 5,214,010 - +2.2 5,214,010 - -2.0 5,214,033 + -0.1 5,214,040 + -2.8 5,214,058 - BWI76_RS25050 0.10 -0.7 5,214,176 - BWI76_RS25050 0.20 -1.6 5,214,189 - BWI76_RS25050 0.21 +0.1 5,214,280 + BWI76_RS25050 0.28 -0.8 5,214,333 - BWI76_RS25050 0.32 -0.1 5,214,349 - BWI76_RS25050 0.34 -0.1 5,214,423 + BWI76_RS25050 0.40 -3.0 5,214,590 - BWI76_RS25050 0.53 -0.6 5,214,627 + BWI76_RS25050 0.56 -0.8 5,214,784 + BWI76_RS25050 0.69 -1.6 5,214,822 + BWI76_RS25050 0.72 +1.1 5,214,830 + BWI76_RS25050 0.72 -0.4 5,214,895 - BWI76_RS25050 0.78 +0.1 5,214,908 - BWI76_RS25050 0.79 -1.2 5,214,918 - BWI76_RS25050 0.79 -0.6 5,215,093 - -2.5 5,215,128 + -1.8 5,215,497 - +0.3
Or see this region's nucleotide sequence