Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17850 and BWI76_RS17855 overlap by 1 nucleotides BWI76_RS17855 and BWI76_RS17860 are separated by 1 nucleotides BWI76_RS17860 and BWI76_RS17865 are separated by 90 nucleotides
BWI76_RS17850: BWI76_RS17850 - alginate lyase, at 3,710,835 to 3,712,073
_RS17850
BWI76_RS17855: BWI76_RS17855 - alginate lyase, at 3,712,073 to 3,714,103
_RS17855
BWI76_RS17860: BWI76_RS17860 - YoaH family protein, at 3,714,105 to 3,714,284
_RS17860
BWI76_RS17865: BWI76_RS17865 - aminodeoxychorismate synthase subunit I, at 3,714,375 to 3,715,730
_RS17865
Position (kb)
3712
3713
3714
3715 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3711.132 kb on + strand, within BWI76_RS17850 at 3711.133 kb on - strand, within BWI76_RS17850 at 3711.135 kb on - strand, within BWI76_RS17850 at 3711.142 kb on + strand, within BWI76_RS17850 at 3711.308 kb on + strand, within BWI76_RS17850 at 3711.310 kb on - strand, within BWI76_RS17850 at 3711.427 kb on - strand, within BWI76_RS17850 at 3711.460 kb on - strand, within BWI76_RS17850 at 3711.487 kb on + strand at 3711.541 kb on + strand, within BWI76_RS17850 at 3711.756 kb on + strand, within BWI76_RS17850 at 3711.831 kb on - strand, within BWI76_RS17850 at 3711.848 kb on - strand, within BWI76_RS17850 at 3712.068 kb on - strand at 3712.250 kb on - strand at 3712.456 kb on + strand, within BWI76_RS17855 at 3712.484 kb on + strand, within BWI76_RS17855 at 3712.570 kb on - strand, within BWI76_RS17855 at 3712.622 kb on + strand, within BWI76_RS17855 at 3712.832 kb on - strand, within BWI76_RS17855 at 3712.936 kb on - strand, within BWI76_RS17855 at 3713.040 kb on + strand, within BWI76_RS17855 at 3713.394 kb on + strand, within BWI76_RS17855 at 3713.514 kb on + strand, within BWI76_RS17855 at 3713.580 kb on + strand, within BWI76_RS17855 at 3713.800 kb on + strand, within BWI76_RS17855 at 3714.075 kb on + strand at 3714.094 kb on - strand at 3714.194 kb on - strand, within BWI76_RS17860 at 3714.261 kb on - strand at 3714.368 kb on - strand at 3714.368 kb on - strand at 3714.445 kb on + strand at 3714.452 kb on + strand at 3714.618 kb on + strand, within BWI76_RS17865 at 3714.642 kb on - strand, within BWI76_RS17865 at 3714.906 kb on - strand, within BWI76_RS17865 at 3714.927 kb on + strand, within BWI76_RS17865 at 3714.965 kb on + strand, within BWI76_RS17865 at 3714.974 kb on - strand, within BWI76_RS17865 at 3714.975 kb on + strand, within BWI76_RS17865
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 3,711,132 + BWI76_RS17850 0.24 -1.4 3,711,133 - BWI76_RS17850 0.24 -2.4 3,711,135 - BWI76_RS17850 0.24 +0.2 3,711,142 + BWI76_RS17850 0.25 +1.2 3,711,308 + BWI76_RS17850 0.38 +0.4 3,711,310 - BWI76_RS17850 0.38 +0.5 3,711,427 - BWI76_RS17850 0.48 -3.2 3,711,460 - BWI76_RS17850 0.50 -1.2 3,711,487 + +1.4 3,711,541 + BWI76_RS17850 0.57 +0.5 3,711,756 + BWI76_RS17850 0.74 -0.6 3,711,831 - BWI76_RS17850 0.80 -0.7 3,711,848 - BWI76_RS17850 0.82 -3.0 3,712,068 - +1.8 3,712,250 - +1.2 3,712,456 + BWI76_RS17855 0.19 -0.4 3,712,484 + BWI76_RS17855 0.20 -1.6 3,712,570 - BWI76_RS17855 0.24 -1.0 3,712,622 + BWI76_RS17855 0.27 -0.2 3,712,832 - BWI76_RS17855 0.37 -1.1 3,712,936 - BWI76_RS17855 0.42 -1.2 3,713,040 + BWI76_RS17855 0.48 -0.1 3,713,394 + BWI76_RS17855 0.65 -2.1 3,713,514 + BWI76_RS17855 0.71 -1.3 3,713,580 + BWI76_RS17855 0.74 -0.3 3,713,800 + BWI76_RS17855 0.85 -0.4 3,714,075 + +0.2 3,714,094 - -0.1 3,714,194 - BWI76_RS17860 0.49 -0.9 3,714,261 - +0.8 3,714,368 - +1.1 3,714,368 - +0.8 3,714,445 + -0.1 3,714,452 + +0.2 3,714,618 + BWI76_RS17865 0.18 +0.5 3,714,642 - BWI76_RS17865 0.20 +0.5 3,714,906 - BWI76_RS17865 0.39 -0.0 3,714,927 + BWI76_RS17865 0.41 +0.2 3,714,965 + BWI76_RS17865 0.44 -2.0 3,714,974 - BWI76_RS17865 0.44 +0.7 3,714,975 + BWI76_RS17865 0.44 +1.0
Or see this region's nucleotide sequence