Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15090 and BWI76_RS15095 are separated by 18 nucleotides BWI76_RS15095 and BWI76_RS15100 are separated by 29 nucleotides BWI76_RS15100 and BWI76_RS15105 are separated by 38 nucleotides
BWI76_RS15090: BWI76_RS15090 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 3,161,173 to 3,161,958
_RS15090
BWI76_RS15095: BWI76_RS15095 - isochorismatase, at 3,161,977 to 3,162,609
_RS15095
BWI76_RS15100: BWI76_RS15100 - phenazine biosynthesis protein PhzE, at 3,162,639 to 3,164,588
_RS15100
BWI76_RS15105: BWI76_RS15105 - 4-hydroxyphenylacetate 3-monooxygenase oxygenase component, at 3,164,627 to 3,166,141
_RS15105
Position (kb)
3162
3163
3164
3165 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3161.719 kb on - strand, within BWI76_RS15090 at 3161.876 kb on + strand, within BWI76_RS15090 at 3161.884 kb on - strand at 3161.975 kb on - strand at 3161.991 kb on + strand at 3162.061 kb on - strand, within BWI76_RS15095 at 3162.120 kb on - strand at 3162.120 kb on - strand, within BWI76_RS15095 at 3162.229 kb on - strand, within BWI76_RS15095 at 3162.229 kb on - strand, within BWI76_RS15095 at 3162.545 kb on - strand, within BWI76_RS15095 at 3162.652 kb on - strand at 3162.720 kb on - strand at 3162.766 kb on + strand at 3163.103 kb on - strand, within BWI76_RS15100 at 3163.149 kb on + strand, within BWI76_RS15100 at 3163.200 kb on - strand at 3163.230 kb on - strand, within BWI76_RS15100 at 3163.297 kb on + strand, within BWI76_RS15100 at 3163.451 kb on + strand, within BWI76_RS15100 at 3163.491 kb on + strand, within BWI76_RS15100 at 3163.513 kb on + strand, within BWI76_RS15100 at 3163.572 kb on - strand, within BWI76_RS15100 at 3163.659 kb on + strand, within BWI76_RS15100 at 3163.667 kb on - strand, within BWI76_RS15100 at 3163.702 kb on + strand, within BWI76_RS15100 at 3163.986 kb on - strand, within BWI76_RS15100 at 3163.998 kb on + strand, within BWI76_RS15100 at 3164.036 kb on - strand, within BWI76_RS15100 at 3164.046 kb on - strand, within BWI76_RS15100 at 3164.058 kb on - strand, within BWI76_RS15100 at 3164.086 kb on + strand, within BWI76_RS15100 at 3164.086 kb on + strand at 3164.094 kb on - strand, within BWI76_RS15100 at 3164.256 kb on + strand, within BWI76_RS15100 at 3164.332 kb on - strand, within BWI76_RS15100 at 3164.356 kb on - strand, within BWI76_RS15100 at 3164.356 kb on - strand, within BWI76_RS15100 at 3164.373 kb on - strand, within BWI76_RS15100 at 3164.390 kb on - strand, within BWI76_RS15100 at 3164.392 kb on + strand, within BWI76_RS15100 at 3164.392 kb on + strand, within BWI76_RS15100 at 3164.392 kb on + strand, within BWI76_RS15100 at 3164.392 kb on + strand, within BWI76_RS15100 at 3164.400 kb on - strand at 3164.400 kb on - strand at 3164.400 kb on - strand at 3164.400 kb on - strand at 3164.400 kb on - strand at 3164.402 kb on + strand at 3164.410 kb on - strand at 3164.426 kb on + strand at 3164.530 kb on + strand at 3164.535 kb on + strand at 3164.557 kb on + strand at 3164.563 kb on + strand at 3164.563 kb on + strand at 3164.565 kb on - strand at 3164.565 kb on - strand at 3164.571 kb on - strand at 3164.571 kb on - strand at 3164.571 kb on - strand at 3164.619 kb on + strand at 3164.619 kb on + strand at 3164.652 kb on - strand at 3164.675 kb on + strand at 3164.810 kb on + strand, within BWI76_RS15105 at 3164.843 kb on + strand, within BWI76_RS15105 at 3164.844 kb on + strand, within BWI76_RS15105 at 3164.857 kb on + strand, within BWI76_RS15105 at 3164.933 kb on - strand, within BWI76_RS15105 at 3165.129 kb on - strand, within BWI76_RS15105 at 3165.152 kb on + strand, within BWI76_RS15105 at 3165.154 kb on + strand, within BWI76_RS15105 at 3165.165 kb on + strand, within BWI76_RS15105 at 3165.180 kb on + strand, within BWI76_RS15105 at 3165.180 kb on + strand, within BWI76_RS15105 at 3165.223 kb on - strand, within BWI76_RS15105 at 3165.279 kb on - strand, within BWI76_RS15105 at 3165.284 kb on + strand, within BWI76_RS15105 at 3165.284 kb on - strand, within BWI76_RS15105 at 3165.294 kb on + strand, within BWI76_RS15105 at 3165.294 kb on + strand, within BWI76_RS15105 at 3165.294 kb on + strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.302 kb on - strand, within BWI76_RS15105 at 3165.373 kb on + strand at 3165.402 kb on + strand, within BWI76_RS15105 at 3165.412 kb on + strand, within BWI76_RS15105 at 3165.418 kb on + strand, within BWI76_RS15105 at 3165.467 kb on - strand, within BWI76_RS15105 at 3165.476 kb on + strand, within BWI76_RS15105 at 3165.476 kb on + strand, within BWI76_RS15105 at 3165.484 kb on - strand, within BWI76_RS15105 at 3165.486 kb on + strand, within BWI76_RS15105 at 3165.502 kb on - strand, within BWI76_RS15105 at 3165.504 kb on + strand, within BWI76_RS15105 at 3165.504 kb on + strand, within BWI76_RS15105 at 3165.509 kb on + strand, within BWI76_RS15105 at 3165.510 kb on - strand, within BWI76_RS15105 at 3165.512 kb on - strand, within BWI76_RS15105 at 3165.512 kb on - strand, within BWI76_RS15105 at 3165.512 kb on - strand, within BWI76_RS15105 at 3165.512 kb on - strand, within BWI76_RS15105 at 3165.526 kb on - strand, within BWI76_RS15105 at 3165.526 kb on - strand, within BWI76_RS15105
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 3,161,719 - BWI76_RS15090 0.69 -0.1 3,161,876 + BWI76_RS15090 0.89 -0.0 3,161,884 - -0.7 3,161,975 - +1.9 3,161,991 + +0.5 3,162,061 - BWI76_RS15095 0.13 +1.2 3,162,120 - -0.5 3,162,120 - BWI76_RS15095 0.23 +0.5 3,162,229 - BWI76_RS15095 0.40 +0.2 3,162,229 - BWI76_RS15095 0.40 +0.2 3,162,545 - BWI76_RS15095 0.90 +0.0 3,162,652 - -2.2 3,162,720 - -3.8 3,162,766 + +0.4 3,163,103 - BWI76_RS15100 0.24 -1.4 3,163,149 + BWI76_RS15100 0.26 -0.5 3,163,200 - +3.5 3,163,230 - BWI76_RS15100 0.30 -2.0 3,163,297 + BWI76_RS15100 0.34 -3.2 3,163,451 + BWI76_RS15100 0.42 -1.0 3,163,491 + BWI76_RS15100 0.44 +0.8 3,163,513 + BWI76_RS15100 0.45 -3.6 3,163,572 - BWI76_RS15100 0.48 -1.1 3,163,659 + BWI76_RS15100 0.52 -2.4 3,163,667 - BWI76_RS15100 0.53 -0.7 3,163,702 + BWI76_RS15100 0.55 -1.1 3,163,986 - BWI76_RS15100 0.69 -0.1 3,163,998 + BWI76_RS15100 0.70 -2.2 3,164,036 - BWI76_RS15100 0.72 -0.5 3,164,046 - BWI76_RS15100 0.72 +0.5 3,164,058 - BWI76_RS15100 0.73 -0.6 3,164,086 + BWI76_RS15100 0.74 -0.2 3,164,086 + +0.2 3,164,094 - BWI76_RS15100 0.75 +2.5 3,164,256 + BWI76_RS15100 0.83 +1.1 3,164,332 - BWI76_RS15100 0.87 -1.1 3,164,356 - BWI76_RS15100 0.88 +0.7 3,164,356 - BWI76_RS15100 0.88 -1.7 3,164,373 - BWI76_RS15100 0.89 -0.1 3,164,390 - BWI76_RS15100 0.90 +1.3 3,164,392 + BWI76_RS15100 0.90 -2.0 3,164,392 + BWI76_RS15100 0.90 +0.2 3,164,392 + BWI76_RS15100 0.90 +1.4 3,164,392 + BWI76_RS15100 0.90 -2.1 3,164,400 - +1.2 3,164,400 - +0.6 3,164,400 - +0.1 3,164,400 - +0.7 3,164,400 - +0.5 3,164,402 + +2.5 3,164,410 - -2.8 3,164,426 + -2.1 3,164,530 + -0.0 3,164,535 + -1.2 3,164,557 + -0.4 3,164,563 + -0.0 3,164,563 + -0.3 3,164,565 - +1.8 3,164,565 - -1.8 3,164,571 - -0.3 3,164,571 - +0.9 3,164,571 - +1.4 3,164,619 + -0.0 3,164,619 + -1.9 3,164,652 - +0.7 3,164,675 + +1.6 3,164,810 + BWI76_RS15105 0.12 +1.5 3,164,843 + BWI76_RS15105 0.14 -1.2 3,164,844 + BWI76_RS15105 0.14 +1.2 3,164,857 + BWI76_RS15105 0.15 -2.2 3,164,933 - BWI76_RS15105 0.20 +0.5 3,165,129 - BWI76_RS15105 0.33 -0.2 3,165,152 + BWI76_RS15105 0.35 -0.7 3,165,154 + BWI76_RS15105 0.35 -0.7 3,165,165 + BWI76_RS15105 0.36 -1.5 3,165,180 + BWI76_RS15105 0.37 -0.7 3,165,180 + BWI76_RS15105 0.37 -1.5 3,165,223 - BWI76_RS15105 0.39 -0.3 3,165,279 - BWI76_RS15105 0.43 -1.6 3,165,284 + BWI76_RS15105 0.43 -0.2 3,165,284 - BWI76_RS15105 0.43 +3.2 3,165,294 + BWI76_RS15105 0.44 +2.0 3,165,294 + BWI76_RS15105 0.44 -0.7 3,165,294 + BWI76_RS15105 0.44 -2.1 3,165,302 - BWI76_RS15105 0.45 -1.8 3,165,302 - BWI76_RS15105 0.45 +0.3 3,165,302 - BWI76_RS15105 0.45 +1.1 3,165,302 - BWI76_RS15105 0.45 +0.6 3,165,302 - BWI76_RS15105 0.45 +0.0 3,165,302 - BWI76_RS15105 0.45 +0.5 3,165,373 + +0.2 3,165,402 + BWI76_RS15105 0.51 -1.3 3,165,412 + BWI76_RS15105 0.52 +0.6 3,165,418 + BWI76_RS15105 0.52 -1.1 3,165,467 - BWI76_RS15105 0.55 +1.1 3,165,476 + BWI76_RS15105 0.56 -0.1 3,165,476 + BWI76_RS15105 0.56 +0.1 3,165,484 - BWI76_RS15105 0.57 -0.5 3,165,486 + BWI76_RS15105 0.57 -0.3 3,165,502 - BWI76_RS15105 0.58 +0.2 3,165,504 + BWI76_RS15105 0.58 -2.8 3,165,504 + BWI76_RS15105 0.58 -1.3 3,165,509 + BWI76_RS15105 0.58 -0.2 3,165,510 - BWI76_RS15105 0.58 +0.3 3,165,512 - BWI76_RS15105 0.58 -3.2 3,165,512 - BWI76_RS15105 0.58 -1.7 3,165,512 - BWI76_RS15105 0.58 +0.5 3,165,512 - BWI76_RS15105 0.58 +0.3 3,165,526 - BWI76_RS15105 0.59 +0.4 3,165,526 - BWI76_RS15105 0.59 +0.1
Or see this region's nucleotide sequence