Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14140

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14135 and BWI76_RS14140 are separated by 2 nucleotidesBWI76_RS14140 and BWI76_RS14145 are separated by 43 nucleotides BWI76_RS14135: BWI76_RS14135 - malto-oligosyltrehalose synthase, at 2,953,943 to 2,956,483 _RS14135 BWI76_RS14140: BWI76_RS14140 - glycogen debranching enzyme, at 2,956,486 to 2,958,561 _RS14140 BWI76_RS14145: BWI76_RS14145 - dihydrolipoyl dehydrogenase, at 2,958,605 to 2,960,002 _RS14145 Position (kb) 2956 2957 2958 2959Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2955.573 kb on + strand, within BWI76_RS14135at 2955.675 kb on + strand, within BWI76_RS14135at 2955.995 kb on - strand, within BWI76_RS14135at 2956.080 kb on - strand, within BWI76_RS14135at 2956.263 kb on - strandat 2956.575 kb on + strandat 2956.595 kb on + strandat 2956.601 kb on + strandat 2957.044 kb on - strand, within BWI76_RS14140at 2957.300 kb on + strand, within BWI76_RS14140at 2957.308 kb on - strand, within BWI76_RS14140at 2957.496 kb on + strand, within BWI76_RS14140at 2957.702 kb on - strand, within BWI76_RS14140at 2957.797 kb on - strand, within BWI76_RS14140at 2957.866 kb on + strand, within BWI76_RS14140at 2957.966 kb on + strand, within BWI76_RS14140at 2958.126 kb on - strand, within BWI76_RS14140at 2958.178 kb on - strand, within BWI76_RS14140at 2958.296 kb on + strand, within BWI76_RS14140at 2958.322 kb on + strand, within BWI76_RS14140at 2958.462 kb on - strandat 2958.700 kb on + strandat 2958.700 kb on + strandat 2958.743 kb on - strandat 2958.830 kb on - strand, within BWI76_RS14145at 2959.053 kb on + strand, within BWI76_RS14145at 2959.278 kb on + strand, within BWI76_RS14145

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,955,573 + BWI76_RS14135 0.64 +0.3
2,955,675 + BWI76_RS14135 0.68 +1.8
2,955,995 - BWI76_RS14135 0.81 -0.4
2,956,080 - BWI76_RS14135 0.84 +1.5
2,956,263 - -0.5
2,956,575 + -1.5
2,956,595 + -1.6
2,956,601 + -2.6
2,957,044 - BWI76_RS14140 0.27 +0.1
2,957,300 + BWI76_RS14140 0.39 -0.6
2,957,308 - BWI76_RS14140 0.40 -1.3
2,957,496 + BWI76_RS14140 0.49 -0.2
2,957,702 - BWI76_RS14140 0.59 -2.5
2,957,797 - BWI76_RS14140 0.63 -0.5
2,957,866 + BWI76_RS14140 0.66 +0.3
2,957,966 + BWI76_RS14140 0.71 +0.3
2,958,126 - BWI76_RS14140 0.79 -0.0
2,958,178 - BWI76_RS14140 0.82 +1.3
2,958,296 + BWI76_RS14140 0.87 -1.2
2,958,322 + BWI76_RS14140 0.88 -0.5
2,958,462 - +0.2
2,958,700 + +3.8
2,958,700 + +1.4
2,958,743 - +1.0
2,958,830 - BWI76_RS14145 0.16 -1.8
2,959,053 + BWI76_RS14145 0.32 -1.0
2,959,278 + BWI76_RS14145 0.48 -2.1

Or see this region's nucleotide sequence