Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14130

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14125 and BWI76_RS14130 are separated by 247 nucleotidesBWI76_RS14130 and BWI76_RS14135 overlap by 4 nucleotides BWI76_RS14125: BWI76_RS14125 - SDR family oxidoreductase, at 2,951,027 to 2,951,911 _RS14125 BWI76_RS14130: BWI76_RS14130 - malto-oligosyltrehalose trehalohydrolase, at 2,952,159 to 2,953,946 _RS14130 BWI76_RS14135: BWI76_RS14135 - malto-oligosyltrehalose synthase, at 2,953,943 to 2,956,483 _RS14135 Position (kb) 2952 2953 2954Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2951.201 kb on + strand, within BWI76_RS14125at 2951.201 kb on + strand, within BWI76_RS14125at 2951.366 kb on + strand, within BWI76_RS14125at 2951.379 kb on + strand, within BWI76_RS14125at 2951.457 kb on - strand, within BWI76_RS14125at 2951.515 kb on + strand, within BWI76_RS14125at 2951.525 kb on - strand, within BWI76_RS14125at 2951.622 kb on + strand, within BWI76_RS14125at 2951.624 kb on - strand, within BWI76_RS14125at 2951.630 kb on - strand, within BWI76_RS14125at 2951.630 kb on - strand, within BWI76_RS14125at 2951.630 kb on - strand, within BWI76_RS14125at 2951.630 kb on - strand, within BWI76_RS14125at 2951.650 kb on + strand, within BWI76_RS14125at 2951.687 kb on + strand, within BWI76_RS14125at 2951.711 kb on + strand, within BWI76_RS14125at 2951.716 kb on - strand, within BWI76_RS14125at 2951.796 kb on + strand, within BWI76_RS14125at 2951.836 kb on + strandat 2951.857 kb on + strandat 2951.874 kb on + strandat 2951.877 kb on + strandat 2951.882 kb on + strandat 2951.882 kb on + strandat 2951.882 kb on + strandat 2951.882 kb on + strandat 2951.882 kb on + strandat 2951.882 kb on + strandat 2951.885 kb on - strandat 2951.890 kb on - strandat 2951.890 kb on - strandat 2952.071 kb on + strandat 2952.079 kb on - strandat 2952.080 kb on + strandat 2952.083 kb on - strandat 2952.096 kb on - strandat 2952.098 kb on + strandat 2952.103 kb on + strandat 2952.107 kb on - strandat 2952.111 kb on - strandat 2952.206 kb on + strandat 2952.206 kb on + strandat 2952.210 kb on + strandat 2952.240 kb on + strandat 2952.240 kb on + strandat 2952.241 kb on + strandat 2952.250 kb on + strandat 2952.262 kb on + strandat 2952.262 kb on + strandat 2952.270 kb on - strandat 2952.297 kb on + strandat 2952.297 kb on + strandat 2952.305 kb on - strandat 2952.305 kb on - strandat 2952.305 kb on - strandat 2952.305 kb on - strandat 2952.305 kb on - strandat 2952.305 kb on - strandat 2952.327 kb on + strandat 2952.419 kb on - strand, within BWI76_RS14130at 2952.421 kb on - strand, within BWI76_RS14130at 2952.424 kb on + strand, within BWI76_RS14130at 2952.424 kb on + strand, within BWI76_RS14130at 2952.430 kb on - strand, within BWI76_RS14130at 2952.618 kb on - strand, within BWI76_RS14130at 2952.706 kb on + strand, within BWI76_RS14130at 2952.727 kb on + strand, within BWI76_RS14130at 2952.728 kb on - strand, within BWI76_RS14130at 2952.728 kb on - strand, within BWI76_RS14130at 2952.785 kb on - strand, within BWI76_RS14130at 2952.842 kb on - strand, within BWI76_RS14130at 2952.886 kb on - strand, within BWI76_RS14130at 2953.047 kb on - strand, within BWI76_RS14130at 2953.111 kb on - strand, within BWI76_RS14130at 2953.445 kb on + strand, within BWI76_RS14130at 2953.453 kb on - strandat 2953.906 kb on + strandat 2954.351 kb on + strand, within BWI76_RS14135at 2954.433 kb on - strand, within BWI76_RS14135

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,951,201 + BWI76_RS14125 0.20 +0.4
2,951,201 + BWI76_RS14125 0.20 -2.1
2,951,366 + BWI76_RS14125 0.38 +0.9
2,951,379 + BWI76_RS14125 0.40 -1.6
2,951,457 - BWI76_RS14125 0.49 +0.3
2,951,515 + BWI76_RS14125 0.55 +0.1
2,951,525 - BWI76_RS14125 0.56 -3.4
2,951,622 + BWI76_RS14125 0.67 -0.1
2,951,624 - BWI76_RS14125 0.67 +0.4
2,951,630 - BWI76_RS14125 0.68 +2.0
2,951,630 - BWI76_RS14125 0.68 +1.4
2,951,630 - BWI76_RS14125 0.68 -0.6
2,951,630 - BWI76_RS14125 0.68 +1.6
2,951,650 + BWI76_RS14125 0.70 +1.4
2,951,687 + BWI76_RS14125 0.75 +0.8
2,951,711 + BWI76_RS14125 0.77 -1.8
2,951,716 - BWI76_RS14125 0.78 +0.6
2,951,796 + BWI76_RS14125 0.87 +0.4
2,951,836 + +2.4
2,951,857 + +1.4
2,951,874 + -1.0
2,951,877 + -0.9
2,951,882 + -1.1
2,951,882 + +0.0
2,951,882 + -2.6
2,951,882 + -1.7
2,951,882 + +0.4
2,951,882 + -1.6
2,951,885 - -0.4
2,951,890 - +1.6
2,951,890 - +1.2
2,952,071 + +0.7
2,952,079 - +0.3
2,952,080 + -0.6
2,952,083 - -1.3
2,952,096 - -1.0
2,952,098 + +0.7
2,952,103 + +0.9
2,952,107 - +0.1
2,952,111 - -0.7
2,952,206 + -0.8
2,952,206 + +2.6
2,952,210 + -0.1
2,952,240 + -1.6
2,952,240 + +1.7
2,952,241 + -0.5
2,952,250 + +0.7
2,952,262 + -1.4
2,952,262 + -2.5
2,952,270 - +0.9
2,952,297 + +0.7
2,952,297 + -2.9
2,952,305 - +0.1
2,952,305 - +0.1
2,952,305 - -2.1
2,952,305 - -1.7
2,952,305 - -1.1
2,952,305 - -0.0
2,952,327 + -1.5
2,952,419 - BWI76_RS14130 0.15 +0.2
2,952,421 - BWI76_RS14130 0.15 -1.5
2,952,424 + BWI76_RS14130 0.15 -0.3
2,952,424 + BWI76_RS14130 0.15 -0.3
2,952,430 - BWI76_RS14130 0.15 +0.1
2,952,618 - BWI76_RS14130 0.26 +0.9
2,952,706 + BWI76_RS14130 0.31 +0.3
2,952,727 + BWI76_RS14130 0.32 -0.3
2,952,728 - BWI76_RS14130 0.32 +0.7
2,952,728 - BWI76_RS14130 0.32 +1.1
2,952,785 - BWI76_RS14130 0.35 +0.3
2,952,842 - BWI76_RS14130 0.38 +1.7
2,952,886 - BWI76_RS14130 0.41 +0.9
2,953,047 - BWI76_RS14130 0.50 +0.7
2,953,111 - BWI76_RS14130 0.53 -1.3
2,953,445 + BWI76_RS14130 0.72 -0.7
2,953,453 - +0.9
2,953,906 + -2.6
2,954,351 + BWI76_RS14135 0.16 -0.1
2,954,433 - BWI76_RS14135 0.19 -1.9

Or see this region's nucleotide sequence