Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13400 and BWI76_RS13405 are separated by 365 nucleotides BWI76_RS13405 and BWI76_RS13410 are separated by 19 nucleotides
BWI76_RS13400: BWI76_RS13400 - GntR family transcriptional regulator, at 2,794,325 to 2,795,737
_RS13400
BWI76_RS13405: BWI76_RS13405 - spermidine/putrescine ABC transporter substrate-binding protein, at 2,796,103 to 2,797,248
_RS13405
BWI76_RS13410: BWI76_RS13410 - polyamine ABC transporter ATP-binding protein, at 2,797,268 to 2,798,278
_RS13410
Position (kb)
2796
2797
2798 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2795.389 kb on + strand, within BWI76_RS13400 at 2795.401 kb on + strand, within BWI76_RS13400 at 2795.601 kb on - strand at 2795.663 kb on + strand at 2795.736 kb on + strand at 2795.751 kb on + strand at 2795.756 kb on + strand at 2795.772 kb on + strand at 2795.783 kb on + strand at 2796.023 kb on - strand at 2796.092 kb on + strand at 2796.141 kb on + strand at 2796.362 kb on + strand, within BWI76_RS13405 at 2796.370 kb on - strand, within BWI76_RS13405 at 2796.510 kb on + strand, within BWI76_RS13405 at 2796.946 kb on + strand, within BWI76_RS13405 at 2796.985 kb on + strand, within BWI76_RS13405 at 2797.092 kb on + strand, within BWI76_RS13405 at 2797.769 kb on - strand, within BWI76_RS13410 at 2797.780 kb on + strand, within BWI76_RS13410 at 2797.839 kb on + strand, within BWI76_RS13410
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,795,389 + BWI76_RS13400 0.75 -0.1 2,795,401 + BWI76_RS13400 0.76 +1.1 2,795,601 - -3.6 2,795,663 + -0.3 2,795,736 + -0.5 2,795,751 + +0.4 2,795,756 + -0.2 2,795,772 + +0.2 2,795,783 + +0.1 2,796,023 - -2.5 2,796,092 + -1.9 2,796,141 + -0.7 2,796,362 + BWI76_RS13405 0.23 +0.7 2,796,370 - BWI76_RS13405 0.23 -1.2 2,796,510 + BWI76_RS13405 0.36 +0.3 2,796,946 + BWI76_RS13405 0.74 +0.5 2,796,985 + BWI76_RS13405 0.77 -3.6 2,797,092 + BWI76_RS13405 0.86 -2.6 2,797,769 - BWI76_RS13410 0.50 +0.7 2,797,780 + BWI76_RS13410 0.51 -1.8 2,797,839 + BWI76_RS13410 0.56 +1.1
Or see this region's nucleotide sequence