Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12955 and BWI76_RS12960 are separated by 65 nucleotides BWI76_RS12960 and BWI76_RS12965 are separated by 239 nucleotides BWI76_RS12965 and BWI76_RS12970 are separated by 111 nucleotides
BWI76_RS12955: BWI76_RS12955 - multidrug efflux RND transporter permease subunit OqxB, at 2,698,844 to 2,701,996
_RS12955
BWI76_RS12960: BWI76_RS12960 - transcriptional regulator, at 2,702,062 to 2,702,541
_RS12960
BWI76_RS12965: BWI76_RS12965 - LysR family transcriptional regulator, at 2,702,781 to 2,703,650
_RS12965
BWI76_RS12970: BWI76_RS12970 - MFS transporter, at 2,703,762 to 2,705,198
_RS12970
Position (kb)
2702
2703
2704 Strain fitness (log2 ratio)
-1
0
1
2 at 2701.853 kb on - strand at 2701.935 kb on + strand at 2702.072 kb on + strand at 2702.080 kb on - strand at 2702.497 kb on + strand at 2702.575 kb on + strand at 2702.583 kb on + strand at 2702.583 kb on + strand at 2702.590 kb on + strand at 2702.591 kb on - strand at 2702.779 kb on + strand at 2702.779 kb on + strand at 2703.053 kb on - strand, within BWI76_RS12965 at 2703.123 kb on + strand, within BWI76_RS12965 at 2703.151 kb on + strand, within BWI76_RS12965 at 2703.169 kb on + strand, within BWI76_RS12965 at 2703.194 kb on - strand, within BWI76_RS12965 at 2703.338 kb on - strand, within BWI76_RS12965 at 2703.491 kb on - strand, within BWI76_RS12965 at 2703.757 kb on + strand at 2703.937 kb on + strand, within BWI76_RS12970 at 2704.208 kb on - strand, within BWI76_RS12970 at 2704.340 kb on + strand, within BWI76_RS12970 at 2704.441 kb on + strand, within BWI76_RS12970 at 2704.556 kb on + strand, within BWI76_RS12970 at 2704.587 kb on - strand, within BWI76_RS12970 at 2704.587 kb on - strand, within BWI76_RS12970 at 2704.593 kb on - strand, within BWI76_RS12970 at 2704.597 kb on - strand, within BWI76_RS12970
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,701,853 - +0.3 2,701,935 + -0.9 2,702,072 + +0.2 2,702,080 - -0.6 2,702,497 + +0.0 2,702,575 + +0.3 2,702,583 + +0.5 2,702,583 + +0.5 2,702,590 + +0.2 2,702,591 - +2.3 2,702,779 + -0.2 2,702,779 + -0.9 2,703,053 - BWI76_RS12965 0.31 -1.2 2,703,123 + BWI76_RS12965 0.39 -0.3 2,703,151 + BWI76_RS12965 0.43 +0.4 2,703,169 + BWI76_RS12965 0.45 -0.1 2,703,194 - BWI76_RS12965 0.47 -1.4 2,703,338 - BWI76_RS12965 0.64 +0.4 2,703,491 - BWI76_RS12965 0.82 -1.7 2,703,757 + +0.7 2,703,937 + BWI76_RS12970 0.12 +1.2 2,704,208 - BWI76_RS12970 0.31 +0.0 2,704,340 + BWI76_RS12970 0.40 +0.6 2,704,441 + BWI76_RS12970 0.47 +0.2 2,704,556 + BWI76_RS12970 0.55 -1.0 2,704,587 - BWI76_RS12970 0.57 +0.2 2,704,587 - BWI76_RS12970 0.57 +0.3 2,704,593 - BWI76_RS12970 0.58 +0.7 2,704,597 - BWI76_RS12970 0.58 +1.9
Or see this region's nucleotide sequence