Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09740 and BWI76_RS09745 are separated by 382 nucleotides BWI76_RS09745 and BWI76_RS09750 are separated by 114 nucleotides BWI76_RS09750 and BWI76_RS09755 are separated by 186 nucleotides
BWI76_RS09740: BWI76_RS09740 - formate transporter FocA, at 2,042,161 to 2,043,018
_RS09740
BWI76_RS09745: BWI76_RS09745 - 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO, at 2,043,401 to 2,045,161
_RS09745
BWI76_RS09750: BWI76_RS09750 - DUF421 domain-containing protein, at 2,045,276 to 2,045,968
_RS09750
BWI76_RS09755: BWI76_RS09755 - phosphoserine transaminase, at 2,046,155 to 2,047,243
_RS09755
Position (kb)
2043
2044
2045
2046 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2042.484 kb on + strand, within BWI76_RS09740 at 2042.584 kb on + strand, within BWI76_RS09740 at 2042.672 kb on - strand, within BWI76_RS09740 at 2042.754 kb on + strand, within BWI76_RS09740 at 2042.864 kb on - strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.900 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.910 kb on + strand, within BWI76_RS09740 at 2042.976 kb on + strand at 2042.978 kb on + strand at 2043.004 kb on + strand at 2043.018 kb on + strand at 2043.026 kb on - strand at 2043.028 kb on + strand at 2043.030 kb on - strand at 2043.030 kb on - strand at 2043.063 kb on + strand at 2043.063 kb on + strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.097 kb on - strand at 2043.097 kb on - strand at 2043.121 kb on - strand at 2043.345 kb on + strand at 2043.447 kb on + strand at 2043.455 kb on - strand at 2043.530 kb on - strand at 2043.613 kb on - strand, within BWI76_RS09745 at 2043.635 kb on + strand, within BWI76_RS09745 at 2043.689 kb on + strand, within BWI76_RS09745 at 2043.711 kb on - strand, within BWI76_RS09745 at 2043.716 kb on - strand, within BWI76_RS09745 at 2043.778 kb on + strand, within BWI76_RS09745 at 2043.786 kb on - strand, within BWI76_RS09745 at 2044.025 kb on + strand, within BWI76_RS09745 at 2044.097 kb on + strand, within BWI76_RS09745 at 2044.234 kb on + strand, within BWI76_RS09745 at 2044.386 kb on - strand, within BWI76_RS09745 at 2044.549 kb on - strand, within BWI76_RS09745 at 2045.018 kb on + strand at 2045.018 kb on + strand at 2045.026 kb on - strand at 2045.041 kb on + strand at 2045.041 kb on + strand at 2045.259 kb on - strand at 2045.259 kb on - strand at 2045.337 kb on + strand at 2045.347 kb on + strand, within BWI76_RS09750 at 2045.354 kb on + strand, within BWI76_RS09750 at 2045.361 kb on - strand, within BWI76_RS09750 at 2045.433 kb on - strand, within BWI76_RS09750 at 2045.490 kb on + strand, within BWI76_RS09750 at 2045.778 kb on - strand, within BWI76_RS09750 at 2045.796 kb on + strand, within BWI76_RS09750 at 2045.934 kb on + strand at 2045.999 kb on - strand at 2046.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,042,484 + BWI76_RS09740 0.38 +0.2 2,042,584 + BWI76_RS09740 0.49 -0.0 2,042,672 - BWI76_RS09740 0.60 -1.3 2,042,754 + BWI76_RS09740 0.69 -2.3 2,042,864 - BWI76_RS09740 0.82 -2.1 2,042,884 + BWI76_RS09740 0.84 -2.9 2,042,884 + BWI76_RS09740 0.84 +0.6 2,042,884 + BWI76_RS09740 0.84 +1.1 2,042,884 + BWI76_RS09740 0.84 +0.1 2,042,892 - BWI76_RS09740 0.85 +0.5 2,042,892 - BWI76_RS09740 0.85 +1.3 2,042,892 - BWI76_RS09740 0.85 -0.5 2,042,892 - BWI76_RS09740 0.85 -0.0 2,042,892 - BWI76_RS09740 0.85 -3.1 2,042,900 - BWI76_RS09740 0.86 -1.1 2,042,902 - BWI76_RS09740 0.86 -0.0 2,042,902 - BWI76_RS09740 0.86 +0.2 2,042,910 + BWI76_RS09740 0.87 -0.7 2,042,976 + +0.0 2,042,978 + +2.2 2,043,004 + -2.4 2,043,018 + -1.5 2,043,026 - -1.2 2,043,028 + +1.6 2,043,030 - -0.3 2,043,030 - -0.7 2,043,063 + -0.1 2,043,063 + +1.1 2,043,071 - -1.1 2,043,071 - +2.6 2,043,071 - +0.3 2,043,088 + +0.3 2,043,088 + -0.5 2,043,088 + +2.1 2,043,088 + +1.9 2,043,088 + +1.2 2,043,088 + +1.0 2,043,088 + +2.9 2,043,088 + +1.6 2,043,088 + +0.3 2,043,088 + -0.0 2,043,096 - -2.2 2,043,096 - -1.3 2,043,096 - +0.3 2,043,096 - +0.7 2,043,096 - +1.8 2,043,097 - +0.8 2,043,097 - -0.0 2,043,121 - -1.0 2,043,345 + +1.2 2,043,447 + +1.5 2,043,455 - +1.4 2,043,530 - +0.6 2,043,613 - BWI76_RS09745 0.12 +0.9 2,043,635 + BWI76_RS09745 0.13 +1.1 2,043,689 + BWI76_RS09745 0.16 -1.8 2,043,711 - BWI76_RS09745 0.18 +0.8 2,043,716 - BWI76_RS09745 0.18 +0.8 2,043,778 + BWI76_RS09745 0.21 +1.3 2,043,786 - BWI76_RS09745 0.22 +0.9 2,044,025 + BWI76_RS09745 0.35 +1.0 2,044,097 + BWI76_RS09745 0.40 +1.3 2,044,234 + BWI76_RS09745 0.47 +1.0 2,044,386 - BWI76_RS09745 0.56 +1.7 2,044,549 - BWI76_RS09745 0.65 +1.5 2,045,018 + +1.3 2,045,018 + +1.6 2,045,026 - +0.7 2,045,041 + +1.4 2,045,041 + -0.9 2,045,259 - +0.2 2,045,259 - -0.8 2,045,337 + -1.7 2,045,347 + BWI76_RS09750 0.10 -0.5 2,045,354 + BWI76_RS09750 0.11 -0.0 2,045,361 - BWI76_RS09750 0.12 -1.0 2,045,433 - BWI76_RS09750 0.23 -0.1 2,045,490 + BWI76_RS09750 0.31 -0.0 2,045,778 - BWI76_RS09750 0.72 -0.6 2,045,796 + BWI76_RS09750 0.75 -1.5 2,045,934 + +0.6 2,045,999 - -0.5 2,046,054 - -2.4
Or see this region's nucleotide sequence