Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15855

Experiment: Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
3,346,770	+		ABZR87_RS15850	0.27	+1.5
3,346,770	+		ABZR87_RS15850	0.27	+1.0
3,346,771	-		ABZR87_RS15850	0.27	+1.0
3,346,771	-		ABZR87_RS15850	0.27	+0.4
3,346,771	-		ABZR87_RS15850	0.27	+2.3
3,346,855	-		ABZR87_RS15850	0.33	+1.3
3,346,866	+		ABZR87_RS15850	0.34	+5.4
3,346,869	+		ABZR87_RS15850	0.34	+2.2
3,346,870	-		ABZR87_RS15850	0.35	-0.4
3,346,932	+		ABZR87_RS15850	0.39	+0.3
3,346,956	+		ABZR87_RS15850	0.41	-0.1
3,346,956	+		ABZR87_RS15850	0.41	+0.9
3,346,956	+		ABZR87_RS15850	0.41	+2.6
3,346,957	-		ABZR87_RS15850	0.41	+0.7
3,346,957	-		ABZR87_RS15850	0.41	-1.3
3,346,957	-		ABZR87_RS15850	0.41	+0.3
3,346,957	-		ABZR87_RS15850	0.41	+2.4
3,346,957	-		ABZR87_RS15850	0.41	+1.5
3,347,011	-		ABZR87_RS15850	0.45	+0.6
3,347,049	+		ABZR87_RS15850	0.48	+0.3
3,347,049	+		ABZR87_RS15850	0.48	+0.2
3,347,049	+		ABZR87_RS15850	0.48	+1.0
3,347,050	-		ABZR87_RS15850	0.48	+1.1
3,347,050	-		ABZR87_RS15850	0.48	+2.3
3,347,050	-		ABZR87_RS15850	0.48	-0.3
3,347,050	-		ABZR87_RS15850	0.48	+1.4
3,347,050	-		ABZR87_RS15850	0.48	+5.2
3,347,139	+		ABZR87_RS15850	0.54	+0.6
3,347,139	+		ABZR87_RS15850	0.54	-0.7
3,347,140	-		ABZR87_RS15850	0.54	-1.4
3,347,286	+		ABZR87_RS15850	0.65	+0.4
3,347,286	+		ABZR87_RS15850	0.65	+0.1
3,347,286	+		ABZR87_RS15850	0.65	+1.0
3,347,286	+		ABZR87_RS15850	0.65	+3.6
3,347,286	+		ABZR87_RS15850	0.65	-0.6
3,347,287	-		ABZR87_RS15850	0.65	+0.7
3,347,287	-		ABZR87_RS15850	0.65	-0.0
3,347,287	-		ABZR87_RS15850	0.65	+1.0
3,347,367	+		ABZR87_RS15850	0.71	+1.1
3,347,367	+		ABZR87_RS15850	0.71	+0.7
3,347,368	-		ABZR87_RS15850	0.71	-1.6
3,347,457	+		ABZR87_RS15850	0.77	-2.3
3,347,457	+		ABZR87_RS15850	0.77	+2.0
3,347,457	+		ABZR87_RS15850	0.77	+1.1
3,347,457	+		ABZR87_RS15850	0.77	-1.6
3,347,457	+		ABZR87_RS15850	0.77	+0.7
3,347,458	-		ABZR87_RS15850	0.77	-0.4
3,347,458	-		ABZR87_RS15850	0.77	+1.0
3,347,565	+		ABZR87_RS15850	0.85	+2.5
3,347,565	+		ABZR87_RS15850	0.85	+0.2
3,347,566	-		ABZR87_RS15850	0.85	+0.1
3,347,569	+		ABZR87_RS15850	0.85	+7.4
3,347,691	+				+1.3
3,347,691	+				-0.2
3,347,691	+				-0.4
3,347,692	-				+1.1
3,347,697	+				+1.0
3,347,697	+				+2.3
3,347,698	-				+1.7
3,347,698	-				+0.3
3,347,698	-				-1.4
3,347,698	-				+1.0
3,347,888	+				+1.2
3,347,889	-				-0.0
3,347,889	-				+3.0
3,347,889	-				+0.4
3,347,927	+				-0.3
3,347,927	+				+0.8
3,347,927	+				+1.6
3,347,928	-				-1.4
3,347,928	-				-0.4
3,347,928	-				+0.5
3,348,300	-		ABZR87_RS15855	0.33	+1.3
3,348,300	-		ABZR87_RS15855	0.33	+0.8
3,348,560	+		ABZR87_RS15855	0.49	+1.6
3,348,560	+		ABZR87_RS15855	0.49	-0.7
3,348,590	+		ABZR87_RS15855	0.51	-0.1
3,348,591	-		ABZR87_RS15855	0.51	+1.5
3,348,591	-		ABZR87_RS15855	0.51	+3.4
3,348,641	+		ABZR87_RS15855	0.54	+3.5
3,348,642	-		ABZR87_RS15855	0.54	+1.9
3,348,642	-		ABZR87_RS15855	0.54	+5.0
3,348,730	-		ABZR87_RS15855	0.59	+0.6
3,348,731	+		ABZR87_RS15855	0.59	+0.4
3,348,731	+		ABZR87_RS15855	0.59	+0.8
3,348,731	+		ABZR87_RS15855	0.59	+0.7
3,348,731	+		ABZR87_RS15855	0.59	+2.4
3,348,732	-		ABZR87_RS15855	0.59	+0.7
3,348,732	-		ABZR87_RS15855	0.59	+0.1
3,348,732	-		ABZR87_RS15855	0.59	+0.4
3,348,732	-		ABZR87_RS15855	0.59	+0.3
3,348,732	-		ABZR87_RS15855	0.59	-0.2
3,348,773	+		ABZR87_RS15855	0.62	-0.3
3,348,774	-		ABZR87_RS15855	0.62	+1.2
3,348,905	+		ABZR87_RS15855	0.70	-0.7
3,348,905	+		ABZR87_RS15855	0.70	+2.2
3,348,905	+		ABZR87_RS15855	0.70	-1.4
3,348,905	+		ABZR87_RS15855	0.70	-2.0
3,348,906	-		ABZR87_RS15855	0.70	+2.4
3,348,933	-		ABZR87_RS15855	0.72	+1.2
3,348,942	-		ABZR87_RS15855	0.72	+1.1
3,348,977	+		ABZR87_RS15855	0.75	-0.6
3,348,977	+		ABZR87_RS15855	0.75	-0.9
3,348,977	+		ABZR87_RS15855	0.75	+0.7
3,348,978	-		ABZR87_RS15855	0.75	+0.7
3,349,160	+		ABZR87_RS15855	0.86	+0.2
3,349,160	+		ABZR87_RS15855	0.86	+1.4
3,349,160	+		ABZR87_RS15855	0.86	+2.8
3,349,161	-		ABZR87_RS15855	0.86	+0.1
3,349,161	-		ABZR87_RS15855	0.86	+3.8
3,349,161	-		ABZR87_RS15855	0.86	+1.4
3,349,166	+		ABZR87_RS15855	0.86	+0.6
3,349,166	+		ABZR87_RS15855	0.86	+1.7
3,349,167	-		ABZR87_RS15855	0.86	+0.7
3,349,167	-		ABZR87_RS15855	0.86	-0.0
3,349,206	-		ABZR87_RS15855	0.89	+1.4
3,349,221	-		ABZR87_RS15855	0.90	-0.6
3,349,320	-				-1.1
3,349,474	+				+0.8
3,349,475	-				-0.1
3,349,489	+		ABZR87_RS15860	0.10	-0.0
3,349,612	+		ABZR87_RS15860	0.23	+1.8
3,349,612	+		ABZR87_RS15860	0.23	+2.5
3,349,613	-		ABZR87_RS15860	0.23	+2.3
3,349,613	-		ABZR87_RS15860	0.23	+0.7
3,349,613	-		ABZR87_RS15860	0.23	+0.1
3,349,613	-		ABZR87_RS15860	0.23	-0.6
3,349,660	+		ABZR87_RS15860	0.28	+2.4
3,349,660	+		ABZR87_RS15860	0.28	-0.7
3,349,661	-		ABZR87_RS15860	0.28	+0.1
3,349,690	+		ABZR87_RS15860	0.31	+0.9
3,349,691	-		ABZR87_RS15860	0.31	+0.5
3,349,691	-		ABZR87_RS15860	0.31	+0.6
3,349,718	-		ABZR87_RS15860	0.34	-0.0
3,349,732	+		ABZR87_RS15860	0.35	+0.1
3,349,855	+		ABZR87_RS15860	0.48	+1.0
3,350,185	+		ABZR87_RS15860	0.81	+0.6
3,350,185	+		ABZR87_RS15860	0.81	+1.6
3,350,185	+		ABZR87_RS15860	0.81	+0.2
3,350,185	+		ABZR87_RS15860	0.81	+2.4
3,350,185	+		ABZR87_RS15860	0.81	+2.4
3,350,186	-		ABZR87_RS15860	0.81	+0.7
3,350,186	-		ABZR87_RS15860	0.81	+4.9
3,350,186	-		ABZR87_RS15860	0.81	+1.3
3,350,366	+				+0.5
3,350,367	-				+6.2
3,350,367	-				+0.3
3,350,367	-				-0.9
3,350,367	-				-1.7
3,350,389	+				+0.7
3,350,389	+				+2.8