Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08930

Experiment: Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,893,197	+		ABZR87_RS08920	0.19	-1.6
1,893,197	+		ABZR87_RS08920	0.19	-0.3
1,893,199	+		ABZR87_RS08920	0.20	+0.8
1,893,199	+		ABZR87_RS08920	0.20	+0.4
1,893,199	+		ABZR87_RS08920	0.20	-0.4
1,893,200	-		ABZR87_RS08920	0.20	-0.2
1,893,200	-		ABZR87_RS08920	0.20	-0.3
1,893,206	-		ABZR87_RS08920	0.21	+0.7
1,893,206	-		ABZR87_RS08920	0.21	+0.6
1,893,246	+		ABZR87_RS08920	0.28	+2.6
1,893,247	-		ABZR87_RS08920	0.28	+0.0
1,893,247	-		ABZR87_RS08920	0.28	-0.1
1,893,261	+		ABZR87_RS08920	0.30	-0.2
1,893,262	-		ABZR87_RS08920	0.30	-1.3
1,893,262	-		ABZR87_RS08920	0.30	-0.3
1,893,262	-		ABZR87_RS08920	0.30	-0.8
1,893,349	-		ABZR87_RS08920	0.45	+0.2
1,893,379	+		ABZR87_RS08920	0.50	+0.7
1,893,379	+		ABZR87_RS08920	0.50	+1.6
1,893,380	-		ABZR87_RS08920	0.50	+0.2
1,893,380	-		ABZR87_RS08920	0.50	-1.2
1,893,380	-		ABZR87_RS08920	0.50	-1.9
1,893,381	+		ABZR87_RS08920	0.50	-1.5
1,893,381	+		ABZR87_RS08920	0.50	-0.0
1,893,381	+		ABZR87_RS08920	0.50	-0.9
1,893,381	+		ABZR87_RS08920	0.50	+0.9
1,893,381	+		ABZR87_RS08920	0.50	-0.5
1,893,381	+		ABZR87_RS08920	0.50	-0.3
1,893,381	+		ABZR87_RS08920	0.50	+0.5
1,893,381	+		ABZR87_RS08920	0.50	-0.2
1,893,381	+		ABZR87_RS08920	0.50	-0.7
1,893,382	-		ABZR87_RS08920	0.50	+0.2
1,893,382	-		ABZR87_RS08920	0.50	-1.4
1,893,382	-		ABZR87_RS08920	0.50	+1.2
1,893,382	-		ABZR87_RS08920	0.50	+0.6
1,893,382	-		ABZR87_RS08920	0.50	-0.8
1,893,382	-		ABZR87_RS08920	0.50	+0.1
1,893,382	-		ABZR87_RS08920	0.50	+0.2
1,893,382	-		ABZR87_RS08920	0.50	-1.1
1,893,382	-		ABZR87_RS08920	0.50	+0.3
1,893,382	-		ABZR87_RS08920	0.50	-1.3
1,893,446	+		ABZR87_RS08920	0.61	-0.6
1,893,446	+		ABZR87_RS08920	0.61	+0.2
1,893,446	+		ABZR87_RS08920	0.61	-0.8
1,893,446	+		ABZR87_RS08920	0.61	-0.6
1,893,447	-		ABZR87_RS08920	0.61	-1.3
1,893,447	-		ABZR87_RS08920	0.61	+1.1
1,893,465	+		ABZR87_RS08920	0.64	+0.2
1,893,465	+		ABZR87_RS08920	0.64	+1.1
1,893,465	+		ABZR87_RS08920	0.64	-1.5
1,893,466	-		ABZR87_RS08920	0.64	-0.2
1,893,466	-		ABZR87_RS08920	0.64	+0.1
1,893,466	-		ABZR87_RS08920	0.64	+0.3
1,893,665	+				-1.7
1,893,665	+				+0.9
1,893,665	+				+0.1
1,893,665	+				-1.5
1,893,666	-				-1.7
1,893,666	-				+0.5
1,893,666	-				+1.0
1,893,666	-				+0.1
1,893,666	-				+0.7
1,893,666	-				+3.2
1,893,666	-				+0.4
1,893,682	+				+0.2
1,893,682	+				+1.2
1,893,682	+				-0.4
1,893,682	+				-1.9
1,893,683	-				-0.5
1,893,683	-				-1.6
1,893,683	-				-0.9
1,893,683	-				+0.9
1,893,886	+		ABZR87_RS08925	0.41	-0.8
1,893,887	-		ABZR87_RS08925	0.41	-1.0
1,893,887	-		ABZR87_RS08925	0.41	+0.9
1,893,916	+		ABZR87_RS08925	0.47	-0.3
1,893,916	+		ABZR87_RS08925	0.47	-0.1
1,893,917	-		ABZR87_RS08925	0.47	-0.9
1,893,964	+		ABZR87_RS08925	0.57	-2.2
1,893,964	+		ABZR87_RS08925	0.57	-1.2
1,893,964	+		ABZR87_RS08925	0.57	+0.3
1,893,964	+		ABZR87_RS08925	0.57	+0.1
1,893,964	+		ABZR87_RS08925	0.57	-1.1
1,893,964	+		ABZR87_RS08925	0.57	-0.3
1,893,964	+		ABZR87_RS08925	0.57	-1.1
1,893,964	+		ABZR87_RS08925	0.57	-0.5
1,893,964	+		ABZR87_RS08925	0.57	-0.9
1,893,965	-		ABZR87_RS08925	0.57	-1.5
1,893,965	-		ABZR87_RS08925	0.57	-0.5
1,893,965	-		ABZR87_RS08925	0.57	-2.1
1,893,965	-		ABZR87_RS08925	0.57	+4.3
1,893,965	-		ABZR87_RS08925	0.57	+2.0
1,893,965	-		ABZR87_RS08925	0.57	+1.1
1,893,965	-		ABZR87_RS08925	0.57	-1.6
1,893,965	-		ABZR87_RS08925	0.57	+1.2
1,893,965	-		ABZR87_RS08925	0.57	-0.3
1,894,062	-		ABZR87_RS08925	0.77	-0.9
1,894,062	-		ABZR87_RS08925	0.77	+1.9
1,894,063	+		ABZR87_RS08925	0.77	+0.3
1,894,063	+		ABZR87_RS08925	0.77	+0.2
1,894,063	+		ABZR87_RS08925	0.77	+0.9
1,894,064	-		ABZR87_RS08925	0.78	+0.7
1,894,064	-		ABZR87_RS08925	0.78	-1.4
1,894,122	+		ABZR87_RS08925	0.90	-0.6
1,894,122	+		ABZR87_RS08925	0.90	-0.4
1,894,123	-		ABZR87_RS08925	0.90	-1.4
1,894,482	+				+5.7
1,894,482	+				+0.1
1,894,482	+				+0.9
1,894,483	-				-0.2
1,894,483	-				-1.4
1,894,483	-				+0.5
1,894,539	+				+0.1
1,894,632	+		ABZR87_RS08930	0.11	+0.4
1,894,633	-		ABZR87_RS08930	0.11	-0.8
1,894,633	-		ABZR87_RS08930	0.11	-0.6
1,894,659	+		ABZR87_RS08930	0.12	+2.8
1,894,671	+		ABZR87_RS08930	0.12	-0.2
1,894,671	+		ABZR87_RS08930	0.12	-0.9
1,894,672	-		ABZR87_RS08930	0.12	+0.7
1,894,672	-		ABZR87_RS08930	0.12	+3.8
1,894,672	-		ABZR87_RS08930	0.12	-1.5
1,894,672	-		ABZR87_RS08930	0.12	-2.7
1,894,672	-		ABZR87_RS08930	0.12	+1.0
1,894,712	-		ABZR87_RS08930	0.13	+4.4
1,894,734	+		ABZR87_RS08930	0.14	-0.1
1,894,734	+		ABZR87_RS08930	0.14	+1.9
1,894,734	+		ABZR87_RS08930	0.14	+0.7
1,894,734	+		ABZR87_RS08930	0.14	+0.6
1,894,734	+		ABZR87_RS08930	0.14	-0.3
1,894,735	-		ABZR87_RS08930	0.14	-1.8
1,894,735	-		ABZR87_RS08930	0.14	-0.6
1,894,735	-		ABZR87_RS08930	0.14	-0.7
1,894,735	-		ABZR87_RS08930	0.14	-0.9
1,894,735	-		ABZR87_RS08930	0.14	-1.3
1,894,735	-		ABZR87_RS08930	0.14	+0.8
1,894,744	+		ABZR87_RS08930	0.14	+3.8
1,894,744	+		ABZR87_RS08930	0.14	-0.9
1,894,745	-		ABZR87_RS08930	0.14	+0.8
1,894,758	+		ABZR87_RS08930	0.14	-1.0
1,894,758	+		ABZR87_RS08930	0.14	+1.9
1,894,759	-		ABZR87_RS08930	0.14	-1.5
1,894,759	-		ABZR87_RS08930	0.14	-0.0
1,894,759	-		ABZR87_RS08930	0.14	+1.5
1,894,759	-		ABZR87_RS08930	0.14	-1.5
1,894,767	+		ABZR87_RS08930	0.15	-0.4
1,894,768	-		ABZR87_RS08930	0.15	-1.1
1,894,779	+		ABZR87_RS08930	0.15	-0.5
1,894,780	-		ABZR87_RS08930	0.15	-1.8
1,894,812	+		ABZR87_RS08930	0.16	-0.2
1,894,812	+		ABZR87_RS08930	0.16	-2.5
1,894,812	+		ABZR87_RS08930	0.16	+0.8
1,894,813	-		ABZR87_RS08930	0.16	-1.3
1,894,815	+		ABZR87_RS08930	0.16	-0.2
1,894,816	-		ABZR87_RS08930	0.16	+2.5
1,894,842	+		ABZR87_RS08930	0.17	+0.8
1,894,843	-		ABZR87_RS08930	0.17	-0.9
1,894,857	+		ABZR87_RS08930	0.17	+1.5
1,894,857	+		ABZR87_RS08930	0.17	+1.3
1,894,857	+		ABZR87_RS08930	0.17	-0.4
1,894,857	+		ABZR87_RS08930	0.17	-0.6
1,894,908	+		ABZR87_RS08930	0.18	+0.7
1,894,908	+		ABZR87_RS08930	0.18	+0.8
1,894,908	+		ABZR87_RS08930	0.18	-0.0
1,894,908	+		ABZR87_RS08930	0.18	+1.0
1,894,908	+		ABZR87_RS08930	0.18	-1.9
1,894,909	-		ABZR87_RS08930	0.18	-1.6
1,894,909	-		ABZR87_RS08930	0.18	+1.8
1,894,909	-		ABZR87_RS08930	0.18	+1.1
1,894,957	-		ABZR87_RS08930	0.19	-0.2
1,894,957	-		ABZR87_RS08930	0.19	+5.0
1,895,009	+		ABZR87_RS08930	0.21	-0.5
1,895,010	-		ABZR87_RS08930	0.21	+1.2
1,895,010	-		ABZR87_RS08930	0.21	-0.9
1,895,010	-		ABZR87_RS08930	0.21	+0.6
1,895,047	-		ABZR87_RS08930	0.22	+0.4
1,895,047	-		ABZR87_RS08930	0.22	+0.3
1,895,115	+		ABZR87_RS08930	0.23	-0.7
1,895,116	-		ABZR87_RS08930	0.23	+0.7
1,895,116	-		ABZR87_RS08930	0.23	+0.9
1,895,116	-		ABZR87_RS08930	0.23	-2.4
1,895,126	-		ABZR87_RS08930	0.24	-0.5
1,895,158	-		ABZR87_RS08930	0.24	-1.1
1,895,158	-		ABZR87_RS08930	0.24	-0.5
1,895,158	-		ABZR87_RS08930	0.24	+1.0
1,895,158	-		ABZR87_RS08930	0.24	-1.5
1,895,238	+		ABZR87_RS08930	0.27	+1.5
1,895,238	+		ABZR87_RS08930	0.27	-0.1
1,895,239	-		ABZR87_RS08930	0.27	+1.3
1,895,239	-		ABZR87_RS08930	0.27	+0.7
1,895,295	+		ABZR87_RS08930	0.28	+0.3
1,895,295	+		ABZR87_RS08930	0.28	-1.1
1,895,296	-		ABZR87_RS08930	0.28	-0.7
1,895,472	+		ABZR87_RS08930	0.32	-0.3
1,895,472	+		ABZR87_RS08930	0.32	+0.4
1,895,473	-		ABZR87_RS08930	0.32	+0.8
1,895,473	-		ABZR87_RS08930	0.32	+0.5
1,895,473	-		ABZR87_RS08930	0.32	-0.9
1,895,473	-		ABZR87_RS08930	0.32	-0.7
1,895,473	-		ABZR87_RS08930	0.32	+1.1
1,895,473	-		ABZR87_RS08930	0.32	-0.3
1,895,583	+		ABZR87_RS08930	0.35	+0.4
1,895,584	-		ABZR87_RS08930	0.35	+0.8
1,895,584	-		ABZR87_RS08930	0.35	+0.5
1,895,634	+		ABZR87_RS08930	0.36	+1.1
1,895,634	+		ABZR87_RS08930	0.36	+0.9
1,895,634	+		ABZR87_RS08930	0.36	+0.7
1,895,635	-		ABZR87_RS08930	0.37	-0.7
1,895,700	+		ABZR87_RS08930	0.38	+2.3
1,895,700	+		ABZR87_RS08930	0.38	+0.3
1,895,700	+		ABZR87_RS08930	0.38	+0.6
1,895,701	+		ABZR87_RS08930	0.38	-0.8
1,895,701	-		ABZR87_RS08930	0.38	+0.7
1,895,701	-		ABZR87_RS08930	0.38	-0.2
1,895,701	-		ABZR87_RS08930	0.38	-0.7
1,895,701	-		ABZR87_RS08930	0.38	-0.7
1,895,713	+		ABZR87_RS08930	0.38	+1.1
1,895,714	-		ABZR87_RS08930	0.39	+0.9
1,895,714	-		ABZR87_RS08930	0.39	+1.2
1,895,724	+		ABZR87_RS08930	0.39	+2.6
1,895,724	+		ABZR87_RS08930	0.39	-1.7
1,895,724	+		ABZR87_RS08930	0.39	-2.5
1,895,725	-		ABZR87_RS08930	0.39	+0.2
1,895,725	-		ABZR87_RS08930	0.39	+0.0
1,895,725	-		ABZR87_RS08930	0.39	-0.1
1,895,746	-		ABZR87_RS08930	0.39	-1.5
1,895,784	+		ABZR87_RS08930	0.40	-1.5
1,895,784	+		ABZR87_RS08930	0.40	-0.4
1,895,784	+		ABZR87_RS08930	0.40	+1.0
1,895,784	+		ABZR87_RS08930	0.40	-3.5
1,895,784	+		ABZR87_RS08930	0.40	-0.8
1,895,785	-		ABZR87_RS08930	0.40	+0.5
1,895,785	-		ABZR87_RS08930	0.40	-1.5
1,895,785	-		ABZR87_RS08930	0.40	+0.9
1,895,785	-		ABZR87_RS08930	0.40	-2.6
1,895,785	-		ABZR87_RS08930	0.40	+3.5
1,895,785	-		ABZR87_RS08930	0.40	-0.7
1,895,839	+		ABZR87_RS08930	0.42	-0.4
1,895,889	+		ABZR87_RS08930	0.43	-2.0
1,895,889	+		ABZR87_RS08930	0.43	-1.7
1,895,889	+		ABZR87_RS08930	0.43	+0.4
1,895,890	-		ABZR87_RS08930	0.43	+1.0
1,895,932	+		ABZR87_RS08930	0.44	-0.3
1,895,932	+		ABZR87_RS08930	0.44	-0.4
1,895,932	+		ABZR87_RS08930	0.44	+4.8
1,895,932	+		ABZR87_RS08930	0.44	+0.4
1,895,933	-		ABZR87_RS08930	0.44	+0.1
1,896,039	+		ABZR87_RS08930	0.47	+2.4
1,896,040	-		ABZR87_RS08930	0.47	+1.2
1,896,046	+		ABZR87_RS08930	0.47	-1.4
1,896,055	+		ABZR87_RS08930	0.47	-2.3
1,896,056	-		ABZR87_RS08930	0.47	-1.3
1,896,056	-		ABZR87_RS08930	0.47	-0.1
1,896,063	+		ABZR87_RS08930	0.47	-0.7
1,896,144	+		ABZR87_RS08930	0.49	+5.7
1,896,189	+		ABZR87_RS08930	0.50	+1.5
1,896,189	+		ABZR87_RS08930	0.50	-0.2
1,896,189	+		ABZR87_RS08930	0.50	+0.6
1,896,189	+		ABZR87_RS08930	0.50	+4.8
1,896,190	-		ABZR87_RS08930	0.51	-1.3
1,896,190	-		ABZR87_RS08930	0.51	-2.1
1,896,190	-		ABZR87_RS08930	0.51	+2.2
1,896,190	-		ABZR87_RS08930	0.51	-1.9
1,896,190	-		ABZR87_RS08930	0.51	-0.1
1,896,190	-		ABZR87_RS08930	0.51	-2.1
1,896,190	-		ABZR87_RS08930	0.51	+2.8
1,896,195	+		ABZR87_RS08930	0.51	+1.5
1,896,195	+		ABZR87_RS08930	0.51	-0.1
1,896,195	+		ABZR87_RS08930	0.51	+0.5
1,896,195	+		ABZR87_RS08930	0.51	-1.6
1,896,195	+		ABZR87_RS08930	0.51	-0.2
1,896,195	+		ABZR87_RS08930	0.51	+0.2
1,896,195	+		ABZR87_RS08930	0.51	-0.0
1,896,195	+		ABZR87_RS08930	0.51	+0.8
1,896,195	+		ABZR87_RS08930	0.51	+0.4
1,896,195	+		ABZR87_RS08930	0.51	-1.1
1,896,195	+		ABZR87_RS08930	0.51	+0.7
1,896,195	+		ABZR87_RS08930	0.51	+0.4
1,896,195	+		ABZR87_RS08930	0.51	-0.5
1,896,195	+		ABZR87_RS08930	0.51	-1.5
1,896,195	+		ABZR87_RS08930	0.51	-0.8
1,896,196	-		ABZR87_RS08930	0.51	-1.1
1,896,196	-		ABZR87_RS08930	0.51	+1.7
1,896,196	-		ABZR87_RS08930	0.51	-0.2
1,896,196	-		ABZR87_RS08930	0.51	-0.2
1,896,196	-		ABZR87_RS08930	0.51	+0.0
1,896,196	-		ABZR87_RS08930	0.51	-1.5
1,896,196	-		ABZR87_RS08930	0.51	-0.3
1,896,196	-		ABZR87_RS08930	0.51	-0.5
1,896,199	+		ABZR87_RS08930	0.51	-1.3
1,896,199	+		ABZR87_RS08930	0.51	-0.3
1,896,199	+		ABZR87_RS08930	0.51	-0.8
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