Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06425

Experiment: Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,368,790	-		ABZR87_RS06420	0.21	-0.2
1,368,834	+		ABZR87_RS06420	0.25	+0.7
1,368,834	+		ABZR87_RS06420	0.25	+0.2
1,368,835	-		ABZR87_RS06420	0.25	-1.1
1,368,835	-		ABZR87_RS06420	0.25	-0.2
1,368,835	-		ABZR87_RS06420	0.25	+0.3
1,368,835	-		ABZR87_RS06420	0.25	+1.0
1,368,835	-		ABZR87_RS06420	0.25	-0.6
1,368,835	-		ABZR87_RS06420	0.25	+0.5
1,369,073	+		ABZR87_RS06420	0.48	+1.1
1,369,073	+		ABZR87_RS06420	0.48	+1.2
1,369,073	+		ABZR87_RS06420	0.48	+0.6
1,369,073	+		ABZR87_RS06420	0.48	-2.5
1,369,073	+		ABZR87_RS06420	0.48	+1.6
1,369,073	+		ABZR87_RS06420	0.48	+0.8
1,369,074	-		ABZR87_RS06420	0.48	-1.2
1,369,074	-		ABZR87_RS06420	0.48	+0.4
1,369,113	+		ABZR87_RS06420	0.52	+0.9
1,369,113	+		ABZR87_RS06420	0.52	-0.6
1,369,114	-		ABZR87_RS06420	0.52	+0.8
1,369,114	-		ABZR87_RS06420	0.52	-0.9
1,369,114	-		ABZR87_RS06420	0.52	-1.1
1,369,114	-		ABZR87_RS06420	0.52	-2.7
1,369,114	-		ABZR87_RS06420	0.52	-1.3
1,369,116	+		ABZR87_RS06420	0.52	-2.2
1,369,116	+		ABZR87_RS06420	0.52	-0.1
1,369,116	+		ABZR87_RS06420	0.52	-2.0
1,369,116	+		ABZR87_RS06420	0.52	+1.1
1,369,116	+		ABZR87_RS06420	0.52	+0.9
1,369,116	+		ABZR87_RS06420	0.52	+0.7
1,369,116	+		ABZR87_RS06420	0.52	-0.5
1,369,116	+		ABZR87_RS06420	0.52	-0.3
1,369,117	-		ABZR87_RS06420	0.52	+0.2
1,369,117	-		ABZR87_RS06420	0.52	-1.3
1,369,117	-		ABZR87_RS06420	0.52	+5.5
1,369,117	-		ABZR87_RS06420	0.52	+0.4
1,369,245	+		ABZR87_RS06420	0.65	+0.5
1,369,245	+		ABZR87_RS06420	0.65	+0.7
1,369,245	+		ABZR87_RS06420	0.65	+2.3
1,369,245	+		ABZR87_RS06420	0.65	-2.8
1,369,245	+		ABZR87_RS06420	0.65	+0.8
1,369,245	+		ABZR87_RS06420	0.65	+1.0
1,369,245	+		ABZR87_RS06420	0.65	+1.3
1,369,246	-		ABZR87_RS06420	0.65	+1.3
1,369,246	-		ABZR87_RS06420	0.65	-0.6
1,369,246	-		ABZR87_RS06420	0.65	-1.6
1,369,246	-		ABZR87_RS06420	0.65	+1.0
1,369,246	-		ABZR87_RS06420	0.65	-1.6
1,369,246	-		ABZR87_RS06420	0.65	-1.9
1,369,246	-		ABZR87_RS06420	0.65	-2.2
1,369,280	+		ABZR87_RS06420	0.68	-0.6
1,369,296	+		ABZR87_RS06420	0.70	+1.6
1,369,296	+		ABZR87_RS06420	0.70	+0.2
1,369,296	+		ABZR87_RS06420	0.70	+0.4
1,369,296	+		ABZR87_RS06420	0.70	+0.3
1,369,297	-		ABZR87_RS06420	0.70	+3.4
1,369,297	-		ABZR87_RS06420	0.70	-0.1
1,369,317	+		ABZR87_RS06420	0.72	+1.6
1,369,317	+		ABZR87_RS06420	0.72	+0.4
1,369,317	+		ABZR87_RS06420	0.72	-2.3
1,369,317	+		ABZR87_RS06420	0.72	+2.4
1,369,317	+		ABZR87_RS06420	0.72	+0.4
1,369,317	+		ABZR87_RS06420	0.72	-0.0
1,369,317	+		ABZR87_RS06420	0.72	+0.5
1,369,318	-		ABZR87_RS06420	0.72	+0.8
1,369,318	-		ABZR87_RS06420	0.72	-0.3
1,369,318	-		ABZR87_RS06420	0.72	+0.3
1,369,318	-		ABZR87_RS06420	0.72	-0.2
1,369,386	+		ABZR87_RS06420	0.78	-0.7
1,369,386	+		ABZR87_RS06420	0.78	-0.4
1,369,386	+		ABZR87_RS06420	0.78	+0.5
1,369,386	+		ABZR87_RS06420	0.78	+0.8
1,369,387	-		ABZR87_RS06420	0.78	+0.8
1,369,387	-		ABZR87_RS06420	0.78	+3.2
1,369,444	+		ABZR87_RS06420	0.84	-2.0
1,369,488	+		ABZR87_RS06420	0.88	-2.8
1,369,489	-		ABZR87_RS06420	0.88	-0.9
1,369,509	+				+1.6
1,369,510	-				-1.7
1,369,510	-				+1.3
1,369,510	-				+0.3
1,369,593	+				+0.4
1,369,594	-				+0.3
1,369,594	-				+1.5
1,369,722	+				+2.2
1,369,722	+				-0.9
1,369,723	-				+0.5
1,369,723	-				+0.2
1,369,723	-				+0.4
1,369,723	-				+0.7
1,369,723	-				+2.1
1,369,724	+				+1.7
1,369,725	-				-0.3
1,369,725	-				-2.0
1,369,728	-				+0.3
1,369,808	+		ABZR87_RS06425	0.11	+1.0
1,369,808	+		ABZR87_RS06425	0.11	-0.1
1,369,808	+		ABZR87_RS06425	0.11	+1.6
1,369,826	+		ABZR87_RS06425	0.16	-2.7
1,369,827	-		ABZR87_RS06425	0.16	+0.7
1,370,055	+		ABZR87_RS06425	0.74	-0.4
1,370,055	+		ABZR87_RS06425	0.74	+0.6
1,370,055	+		ABZR87_RS06425	0.74	-0.1
1,370,055	+		ABZR87_RS06425	0.74	+2.8
1,370,055	+		ABZR87_RS06425	0.74	-2.0
1,370,055	+		ABZR87_RS06425	0.74	-0.2
1,370,055	+		ABZR87_RS06425	0.74	-0.2
1,370,055	+		ABZR87_RS06425	0.74	+0.4
1,370,055	+		ABZR87_RS06425	0.74	+0.3
1,370,055	+		ABZR87_RS06425	0.74	+0.9
1,370,055	+		ABZR87_RS06425	0.74	-1.6
1,370,056	-		ABZR87_RS06425	0.74	+0.5
1,370,056	-		ABZR87_RS06425	0.74	+0.9
1,370,056	-		ABZR87_RS06425	0.74	-0.3
1,370,056	-		ABZR87_RS06425	0.74	-0.7
1,370,056	-		ABZR87_RS06425	0.74	+0.1
1,370,056	-		ABZR87_RS06425	0.74	+0.6
1,370,056	-		ABZR87_RS06425	0.74	+1.0
1,370,154	+				-0.9
1,370,154	+				-2.9
1,370,154	+				-2.8
1,370,155	-				-3.1
1,370,155	-				+0.6
1,370,155	-				+3.0
1,370,155	-				-0.3
1,370,155	-				-0.0
1,370,155	-				-0.1
1,370,155	-				+0.8
1,370,161	+				+1.6
1,370,161	+				-0.6
1,370,161	+				+2.0
1,370,161	+				+3.1
1,370,161	+				+0.2
1,370,161	+				-0.0
1,370,161	+				-0.8
1,370,161	+				-3.4
1,370,161	+				-0.5
1,370,162	-				+0.7
1,370,162	-				-2.8
1,370,162	-				+0.6
1,370,162	-				-0.8
1,370,162	-				-1.4
1,370,165	+				+0.7
1,370,166	-				+1.3
1,370,166	-				+0.6
1,370,176	+				-0.1
1,370,296	+		ABZR87_RS06430	0.10	+0.5
1,370,296	+		ABZR87_RS06430	0.10	-0.1
1,370,296	+		ABZR87_RS06430	0.10	+1.0
1,370,297	-		ABZR87_RS06430	0.11	+0.8
1,370,297	-		ABZR87_RS06430	0.11	+1.0
1,370,297	-		ABZR87_RS06430	0.11	-1.1
1,370,297	-		ABZR87_RS06430	0.11	-3.1
1,370,297	-		ABZR87_RS06430	0.11	+0.3
1,370,297	-		ABZR87_RS06430	0.11	-1.9
1,370,297	-		ABZR87_RS06430	0.11	-1.0
1,370,297	-		ABZR87_RS06430	0.11	-0.4
1,370,297	-		ABZR87_RS06430	0.11	-2.1
1,370,297	-		ABZR87_RS06430	0.11	+1.3
1,370,441	+		ABZR87_RS06430	0.67	-2.8
1,370,476	+		ABZR87_RS06430	0.80	-0.3
1,370,476	+		ABZR87_RS06430	0.80	-1.1
1,370,498	+		ABZR87_RS06430	0.89	+0.6
1,370,498	+		ABZR87_RS06430	0.89	+1.2
1,370,498	+		ABZR87_RS06430	0.89	-1.1
1,370,498	+		ABZR87_RS06430	0.89	+2.2
1,370,498	+		ABZR87_RS06430	0.89	-2.7
1,370,498	+		ABZR87_RS06430	0.89	-1.1
1,370,498	+		ABZR87_RS06430	0.89	+1.8
1,370,498	+		ABZR87_RS06430	0.89	-0.6
1,370,498	+		ABZR87_RS06430	0.89	-2.2
1,370,499	-		ABZR87_RS06430	0.89	+1.4
1,370,499	-		ABZR87_RS06430	0.89	+0.1
1,370,499	-		ABZR87_RS06430	0.89	+1.6
1,370,499	-		ABZR87_RS06430	0.89	-0.1
1,370,499	-		ABZR87_RS06430	0.89	+0.2
1,370,499	-		ABZR87_RS06430	0.89	-0.2
1,370,499	-		ABZR87_RS06430	0.89	-2.8
1,370,499	-		ABZR87_RS06430	0.89	-0.7
1,370,499	-		ABZR87_RS06430	0.89	-2.0
1,370,499	-		ABZR87_RS06430	0.89	+0.3
1,370,499	-		ABZR87_RS06430	0.89	-0.1
1,370,499	-		ABZR87_RS06430	0.89	-1.3
1,370,513	+				+0.4
1,370,513	+				-0.6
1,370,513	+				-0.4
1,370,513	+				-0.5
1,370,513	+				+0.5
1,370,513	+				-0.2
1,370,513	+				-1.8
1,370,513	+				+0.6
1,370,514	-				+0.7
1,370,514	-				+0.5
1,370,574	+				+0.1
1,370,575	-				-1.5
1,370,575	-				+0.2
1,370,575	-				-0.0
1,370,575	-				+1.0
1,370,589	+				+0.6
1,370,590	-				-0.6
1,370,590	-				+2.4
1,370,590	-				+1.4
1,370,590	-				-1.5
1,370,732	+				-0.3
1,370,732	+				+1.4
1,370,733	-				-0.5
1,370,733	-				-0.7
1,370,825	+				-2.3
1,370,825	+				+2.1
1,370,825	+				+0.4
1,370,826	-				+1.6
1,370,826	-				-0.7
1,370,963	-		ABZR87_RS06435	0.14	-2.1
1,371,008	+		ABZR87_RS06435	0.19	-2.5
1,371,008	+		ABZR87_RS06435	0.19	+0.1
1,371,117	+		ABZR87_RS06435	0.32	-2.6
1,371,133	+		ABZR87_RS06435	0.34	+2.7
1,371,134	-		ABZR87_RS06435	0.34	+1.3