Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21030

Experiment: Nickel (II) chloride 1.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21025 and BWI76_RS21030 are separated by 68 nucleotidesBWI76_RS21030 and BWI76_RS21035 are separated by 158 nucleotides BWI76_RS21025: BWI76_RS21025 - GMP synthase (glutamine-hydrolyzing), at 4,399,032 to 4,400,609 _RS21025 BWI76_RS21030: BWI76_RS21030 - IMP dehydrogenase, at 4,400,678 to 4,402,144 _RS21030 BWI76_RS21035: BWI76_RS21035 - exodeoxyribonuclease VII large subunit, at 4,402,303 to 4,403,676 _RS21035 Position (kb) 4400 4401 4402 4403Strain fitness (log2 ratio) -1 0 1at 4401.241 kb on - strand, within BWI76_RS21030at 4402.183 kb on + strandat 4402.191 kb on - strandat 4402.243 kb on + strandat 4402.243 kb on + strandat 4402.253 kb on + strandat 4402.253 kb on + strandat 4402.548 kb on - strand, within BWI76_RS21035at 4402.548 kb on - strand, within BWI76_RS21035at 4402.660 kb on + strand, within BWI76_RS21035at 4402.732 kb on - strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.833 kb on + strand, within BWI76_RS21035at 4402.841 kb on - strand, within BWI76_RS21035at 4402.841 kb on - strand, within BWI76_RS21035at 4402.865 kb on + strand, within BWI76_RS21035at 4402.993 kb on - strand, within BWI76_RS21035

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Per-strain Table

Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM
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4,401,241 - BWI76_RS21030 0.38 +1.7
4,402,183 + -0.4
4,402,191 - +0.8
4,402,243 + -0.6
4,402,243 + +0.3
4,402,253 + -0.2
4,402,253 + +0.2
4,402,548 - BWI76_RS21035 0.18 -0.6
4,402,548 - BWI76_RS21035 0.18 -0.0
4,402,660 + BWI76_RS21035 0.26 +0.1
4,402,732 - BWI76_RS21035 0.31 -0.0
4,402,833 + BWI76_RS21035 0.39 +1.0
4,402,833 + BWI76_RS21035 0.39 +0.5
4,402,833 + BWI76_RS21035 0.39 +0.7
4,402,841 - BWI76_RS21035 0.39 -0.1
4,402,841 - BWI76_RS21035 0.39 -0.6
4,402,865 + BWI76_RS21035 0.41 -0.5
4,402,993 - BWI76_RS21035 0.50 +0.9

Or see this region's nucleotide sequence