Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20910 and BWI76_RS20915 are separated by 3 nucleotides BWI76_RS20915 and BWI76_RS20920 are separated by 78 nucleotides BWI76_RS20920 and BWI76_RS20925 are separated by 229 nucleotides
BWI76_RS20910: BWI76_RS20910 - glycine cleavage system transcriptional repressor, at 4,372,500 to 4,373,069
_RS20910
BWI76_RS20915: BWI76_RS20915 - peroxiredoxin, at 4,373,073 to 4,373,543
_RS20915
BWI76_RS20920: BWI76_RS20920 - AI-2E family transporter, at 4,373,622 to 4,374,689
_RS20920
BWI76_RS20925: BWI76_RS20925 - peptidase M48, at 4,374,919 to 4,376,382
_RS20925
Position (kb)
4373
4374
4375 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4372.686 kb on - strand, within BWI76_RS20910 at 4372.701 kb on - strand, within BWI76_RS20910 at 4372.706 kb on + strand at 4372.951 kb on - strand, within BWI76_RS20910 at 4372.991 kb on + strand, within BWI76_RS20910 at 4372.997 kb on - strand, within BWI76_RS20910 at 4373.057 kb on + strand at 4373.106 kb on + strand at 4373.204 kb on + strand, within BWI76_RS20915 at 4373.212 kb on + strand, within BWI76_RS20915 at 4373.212 kb on + strand, within BWI76_RS20915 at 4373.217 kb on - strand, within BWI76_RS20915 at 4373.219 kb on + strand, within BWI76_RS20915 at 4373.220 kb on - strand, within BWI76_RS20915 at 4373.222 kb on - strand, within BWI76_RS20915 at 4373.417 kb on - strand, within BWI76_RS20915 at 4373.514 kb on + strand at 4373.790 kb on - strand, within BWI76_RS20920 at 4373.883 kb on - strand, within BWI76_RS20920 at 4373.969 kb on + strand, within BWI76_RS20920 at 4374.001 kb on - strand, within BWI76_RS20920 at 4374.109 kb on - strand, within BWI76_RS20920 at 4374.491 kb on - strand, within BWI76_RS20920 at 4374.509 kb on + strand, within BWI76_RS20920 at 4374.543 kb on + strand, within BWI76_RS20920 at 4374.872 kb on - strand at 4374.872 kb on - strand at 4374.945 kb on + strand at 4375.040 kb on + strand at 4375.175 kb on - strand, within BWI76_RS20925 at 4375.355 kb on - strand, within BWI76_RS20925 at 4375.658 kb on - strand, within BWI76_RS20925
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 4,372,686 - BWI76_RS20910 0.33 -3.1 4,372,701 - BWI76_RS20910 0.35 -2.0 4,372,706 + +0.4 4,372,951 - BWI76_RS20910 0.79 -0.6 4,372,991 + BWI76_RS20910 0.86 -0.7 4,372,997 - BWI76_RS20910 0.87 -2.5 4,373,057 + -1.3 4,373,106 + -1.5 4,373,204 + BWI76_RS20915 0.28 -1.7 4,373,212 + BWI76_RS20915 0.30 -1.4 4,373,212 + BWI76_RS20915 0.30 -2.7 4,373,217 - BWI76_RS20915 0.31 -3.2 4,373,219 + BWI76_RS20915 0.31 -1.6 4,373,220 - BWI76_RS20915 0.31 -0.5 4,373,222 - BWI76_RS20915 0.32 -2.1 4,373,417 - BWI76_RS20915 0.73 -1.4 4,373,514 + -1.7 4,373,790 - BWI76_RS20920 0.16 -0.8 4,373,883 - BWI76_RS20920 0.24 -1.6 4,373,969 + BWI76_RS20920 0.32 -1.3 4,374,001 - BWI76_RS20920 0.35 -1.4 4,374,109 - BWI76_RS20920 0.46 -0.8 4,374,491 - BWI76_RS20920 0.81 -0.3 4,374,509 + BWI76_RS20920 0.83 -1.4 4,374,543 + BWI76_RS20920 0.86 -0.3 4,374,872 - -0.7 4,374,872 - +1.4 4,374,945 + -0.4 4,375,040 + -1.5 4,375,175 - BWI76_RS20925 0.17 -0.4 4,375,355 - BWI76_RS20925 0.30 +0.9 4,375,658 - BWI76_RS20925 0.50 -0.0
Or see this region's nucleotide sequence