Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19275 and BWI76_RS19280 are separated by 292 nucleotides BWI76_RS19280 and BWI76_RS19285 are separated by 244 nucleotides
BWI76_RS19275: BWI76_RS19275 - DNA-binding response regulator, at 4,015,488 to 4,016,210
_RS19275
BWI76_RS19280: BWI76_RS19280 - U32 family peptidase, at 4,016,503 to 4,017,864
_RS19280
BWI76_RS19285: BWI76_RS19285 - lipid kinase YegS, at 4,018,109 to 4,019,002
_RS19285
Position (kb)
4016
4017
4018 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4015.803 kb on + strand, within BWI76_RS19275 at 4015.817 kb on + strand, within BWI76_RS19275 at 4015.867 kb on + strand, within BWI76_RS19275 at 4016.167 kb on + strand at 4016.168 kb on - strand at 4016.435 kb on - strand at 4016.454 kb on - strand at 4016.481 kb on - strand at 4016.581 kb on + strand at 4016.685 kb on - strand, within BWI76_RS19280 at 4016.720 kb on - strand, within BWI76_RS19280 at 4016.856 kb on + strand, within BWI76_RS19280 at 4016.856 kb on + strand, within BWI76_RS19280 at 4017.009 kb on + strand, within BWI76_RS19280 at 4017.553 kb on + strand, within BWI76_RS19280 at 4017.730 kb on + strand at 4017.767 kb on + strand at 4017.840 kb on - strand at 4017.994 kb on + strand at 4018.002 kb on - strand at 4018.073 kb on + strand at 4018.325 kb on - strand, within BWI76_RS19285 at 4018.446 kb on + strand, within BWI76_RS19285 at 4018.494 kb on - strand, within BWI76_RS19285 at 4018.631 kb on - strand, within BWI76_RS19285 at 4018.687 kb on - strand, within BWI76_RS19285 at 4018.797 kb on + strand, within BWI76_RS19285 at 4018.797 kb on + strand, within BWI76_RS19285 at 4018.805 kb on - strand, within BWI76_RS19285 at 4018.805 kb on - strand, within BWI76_RS19285 at 4018.805 kb on - strand, within BWI76_RS19285 at 4018.815 kb on - strand, within BWI76_RS19285 at 4018.815 kb on - strand, within BWI76_RS19285
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 4,015,803 + BWI76_RS19275 0.44 -1.1 4,015,817 + BWI76_RS19275 0.46 +0.1 4,015,867 + BWI76_RS19275 0.52 +0.1 4,016,167 + +0.8 4,016,168 - +0.4 4,016,435 - +0.2 4,016,454 - +0.9 4,016,481 - -0.2 4,016,581 + +0.8 4,016,685 - BWI76_RS19280 0.13 -0.0 4,016,720 - BWI76_RS19280 0.16 +1.7 4,016,856 + BWI76_RS19280 0.26 +0.8 4,016,856 + BWI76_RS19280 0.26 -2.3 4,017,009 + BWI76_RS19280 0.37 +0.5 4,017,553 + BWI76_RS19280 0.77 +0.4 4,017,730 + +0.4 4,017,767 + -0.2 4,017,840 - -0.3 4,017,994 + -0.4 4,018,002 - -0.0 4,018,073 + -0.4 4,018,325 - BWI76_RS19285 0.24 -0.7 4,018,446 + BWI76_RS19285 0.38 -0.3 4,018,494 - BWI76_RS19285 0.43 +0.1 4,018,631 - BWI76_RS19285 0.58 -1.6 4,018,687 - BWI76_RS19285 0.65 +2.0 4,018,797 + BWI76_RS19285 0.77 +0.3 4,018,797 + BWI76_RS19285 0.77 -0.3 4,018,805 - BWI76_RS19285 0.78 -0.9 4,018,805 - BWI76_RS19285 0.78 +0.2 4,018,805 - BWI76_RS19285 0.78 +1.3 4,018,815 - BWI76_RS19285 0.79 +0.1 4,018,815 - BWI76_RS19285 0.79 -0.6
Or see this region's nucleotide sequence