Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07685

Experiment: Nickel (II) chloride 1.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07680 and BWI76_RS07685 overlap by 8 nucleotidesBWI76_RS07685 and BWI76_RS07690 are separated by 53 nucleotidesBWI76_RS07690 and BWI76_RS07695 are separated by 67 nucleotides BWI76_RS07680: BWI76_RS07680 - transketolase, at 1,627,339 to 1,628,169 _RS07680 BWI76_RS07685: BWI76_RS07685 - transketolase, at 1,628,162 to 1,629,097 _RS07685 BWI76_RS07690: BWI76_RS07690 - enterochelin synthetase component D, at 1,629,151 to 1,629,774 _RS07690 BWI76_RS07695: BWI76_RS07695 - TonB-dependent siderophore receptor, at 1,629,842 to 1,632,091 _RS07695 Position (kb) 1628 1629 1630Strain fitness (log2 ratio) -1 0 1at 1627.181 kb on - strandat 1627.204 kb on + strandat 1627.251 kb on - strandat 1627.388 kb on - strandat 1627.482 kb on + strand, within BWI76_RS07680at 1627.564 kb on - strand, within BWI76_RS07680at 1627.817 kb on - strand, within BWI76_RS07680at 1628.179 kb on + strandat 1628.630 kb on - strand, within BWI76_RS07685at 1629.163 kb on + strandat 1629.281 kb on - strand, within BWI76_RS07690at 1629.496 kb on + strand, within BWI76_RS07690at 1629.507 kb on + strand, within BWI76_RS07690at 1629.515 kb on - strand, within BWI76_RS07690at 1629.542 kb on + strand, within BWI76_RS07690at 1629.685 kb on - strand, within BWI76_RS07690at 1630.091 kb on + strand, within BWI76_RS07695

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Per-strain Table

Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM
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1,627,181 - -0.3
1,627,204 + -1.2
1,627,251 - +0.4
1,627,388 - -0.2
1,627,482 + BWI76_RS07680 0.17 -0.5
1,627,564 - BWI76_RS07680 0.27 +0.3
1,627,817 - BWI76_RS07680 0.58 +0.2
1,628,179 + -0.9
1,628,630 - BWI76_RS07685 0.50 +0.4
1,629,163 + +0.4
1,629,281 - BWI76_RS07690 0.21 -0.3
1,629,496 + BWI76_RS07690 0.55 +0.2
1,629,507 + BWI76_RS07690 0.57 -0.3
1,629,515 - BWI76_RS07690 0.58 -0.3
1,629,542 + BWI76_RS07690 0.63 +0.3
1,629,685 - BWI76_RS07690 0.86 +0.2
1,630,091 + BWI76_RS07695 0.11 +0.2

Or see this region's nucleotide sequence