Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06585 and BWI76_RS06590 overlap by 8 nucleotides BWI76_RS06590 and BWI76_RS06595 overlap by 1 nucleotides BWI76_RS06595 and BWI76_RS06600 are separated by 13 nucleotides BWI76_RS06600 and BWI76_RS06605 are separated by 33 nucleotides
BWI76_RS06585: BWI76_RS06585 - multidrug ABC transporter permease/ATP-binding protein, at 1,383,976 to 1,385,748
_RS06585
BWI76_RS06590: BWI76_RS06590 - multidrug ABC transporter permease/ATP-binding protein, at 1,385,741 to 1,387,519
_RS06590
BWI76_RS06595: BWI76_RS06595 - hypothetical protein, at 1,387,519 to 1,387,749
_RS06595
BWI76_RS06600: BWI76_RS06600 - nitrogen regulatory protein P-II 2, at 1,387,763 to 1,388,101
_RS06600
BWI76_RS06605: BWI76_RS06605 - ammonium transporter, at 1,388,135 to 1,389,421
_RS06605
Position (kb) 1385
1386
1387
1388 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 1384.774 kb on - strand, within BWI76_RS06585 at 1384.871 kb on + strand, within BWI76_RS06585 at 1385.137 kb on - strand, within BWI76_RS06585 at 1385.402 kb on + strand, within BWI76_RS06585 at 1385.526 kb on + strand, within BWI76_RS06585 at 1385.620 kb on + strand at 1385.860 kb on - strand at 1385.945 kb on - strand at 1385.947 kb on + strand, within BWI76_RS06590 at 1385.983 kb on + strand, within BWI76_RS06590 at 1386.152 kb on - strand, within BWI76_RS06590 at 1386.370 kb on + strand, within BWI76_RS06590 at 1386.572 kb on - strand, within BWI76_RS06590 at 1386.751 kb on - strand, within BWI76_RS06590 at 1386.902 kb on - strand, within BWI76_RS06590 at 1387.049 kb on - strand, within BWI76_RS06590 at 1387.075 kb on + strand, within BWI76_RS06590 at 1387.300 kb on - strand, within BWI76_RS06590 at 1387.726 kb on + strand, within BWI76_RS06595 at 1387.915 kb on - strand, within BWI76_RS06600 at 1387.945 kb on - strand, within BWI76_RS06600 at 1388.191 kb on + strand at 1388.199 kb on - strand at 1388.271 kb on - strand, within BWI76_RS06605 at 1388.290 kb on + strand, within BWI76_RS06605 at 1388.290 kb on + strand, within BWI76_RS06605 at 1388.298 kb on - strand, within BWI76_RS06605 at 1388.326 kb on + strand, within BWI76_RS06605 at 1388.362 kb on + strand, within BWI76_RS06605 at 1388.366 kb on + strand, within BWI76_RS06605
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 1,384,774 - BWI76_RS06585 0.45 -1.1 1,384,871 + BWI76_RS06585 0.50 -1.8 1,385,137 - BWI76_RS06585 0.65 +0.5 1,385,402 + BWI76_RS06585 0.80 -1.0 1,385,526 + BWI76_RS06585 0.87 -0.8 1,385,620 + -0.5 1,385,860 - -1.1 1,385,945 - +2.4 1,385,947 + BWI76_RS06590 0.12 -2.1 1,385,983 + BWI76_RS06590 0.14 -1.0 1,386,152 - BWI76_RS06590 0.23 -0.8 1,386,370 + BWI76_RS06590 0.35 -0.6 1,386,572 - BWI76_RS06590 0.47 -0.6 1,386,751 - BWI76_RS06590 0.57 -1.6 1,386,902 - BWI76_RS06590 0.65 -0.5 1,387,049 - BWI76_RS06590 0.74 -0.6 1,387,075 + BWI76_RS06590 0.75 -0.8 1,387,300 - BWI76_RS06590 0.88 -0.6 1,387,726 + BWI76_RS06595 0.90 +0.1 1,387,915 - BWI76_RS06600 0.45 +6.2 1,387,945 - BWI76_RS06600 0.54 +0.4 1,388,191 + +4.4 1,388,199 - +0.0 1,388,271 - BWI76_RS06605 0.11 -1.8 1,388,290 + BWI76_RS06605 0.12 +0.6 1,388,290 + BWI76_RS06605 0.12 -0.2 1,388,298 - BWI76_RS06605 0.13 -0.2 1,388,326 + BWI76_RS06605 0.15 +0.4 1,388,362 + BWI76_RS06605 0.18 +0.6 1,388,366 + BWI76_RS06605 0.18 +0.7
Or see this region's nucleotide sequence