Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02550 and BWI76_RS02555 are separated by 63 nucleotides BWI76_RS02555 and BWI76_RS02560 are separated by 218 nucleotides BWI76_RS02560 and BWI76_RS02565 are separated by 102 nucleotides BWI76_RS02565 and BWI76_RS02570 are separated by 151 nucleotides BWI76_RS02570 and BWI76_RS02575 are separated by 37 nucleotides
BWI76_RS02550: BWI76_RS02550 - protease modulator HflC, at 522,946 to 523,950
_RS02550
BWI76_RS02555: BWI76_RS02555 - hypothetical protein, at 524,014 to 524,304
_RS02555
BWI76_RS02560: BWI76_RS02560 - membrane protein, at 524,523 to 524,720
_RS02560
BWI76_RS02565: BWI76_RS02565 - adenylosuccinate synthase, at 524,823 to 526,121
_RS02565
BWI76_RS02570: BWI76_RS02570 - transcriptional regulator, at 526,273 to 526,698
_RS02570
BWI76_RS02575: BWI76_RS02575 - exoribonuclease R, at 526,736 to 529,183
_RS02575
Position (kb) 524
525
526
527 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 523.828 kb on + strand, within BWI76_RS02550 at 523.874 kb on + strand at 523.946 kb on + strand at 524.042 kb on + strand at 524.048 kb on + strand, within BWI76_RS02555 at 524.067 kb on + strand, within BWI76_RS02555 at 524.071 kb on + strand, within BWI76_RS02555 at 524.125 kb on - strand, within BWI76_RS02555 at 524.172 kb on + strand, within BWI76_RS02555 at 524.180 kb on - strand, within BWI76_RS02555 at 524.240 kb on + strand at 524.240 kb on + strand, within BWI76_RS02555 at 524.240 kb on + strand, within BWI76_RS02555 at 524.248 kb on - strand, within BWI76_RS02555 at 524.259 kb on - strand, within BWI76_RS02555 at 524.361 kb on - strand at 524.361 kb on - strand at 524.420 kb on + strand at 524.486 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.487 kb on + strand at 524.492 kb on + strand at 524.492 kb on + strand at 524.492 kb on + strand at 524.492 kb on + strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.495 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.500 kb on - strand at 524.555 kb on + strand, within BWI76_RS02560 at 524.555 kb on + strand, within BWI76_RS02560 at 524.556 kb on + strand, within BWI76_RS02560 at 524.564 kb on - strand, within BWI76_RS02560 at 524.580 kb on - strand, within BWI76_RS02560 at 524.585 kb on + strand, within BWI76_RS02560 at 524.721 kb on + strand at 526.147 kb on - strand at 526.246 kb on + strand at 526.319 kb on + strand, within BWI76_RS02570 at 526.322 kb on - strand, within BWI76_RS02570 at 526.429 kb on + strand, within BWI76_RS02570 at 526.429 kb on + strand, within BWI76_RS02570 at 526.437 kb on - strand, within BWI76_RS02570 at 526.437 kb on - strand, within BWI76_RS02570 at 526.460 kb on + strand, within BWI76_RS02570 at 526.517 kb on + strand, within BWI76_RS02570 at 526.580 kb on + strand, within BWI76_RS02570 at 526.635 kb on + strand, within BWI76_RS02570 at 526.715 kb on + strand at 526.785 kb on - strand at 526.864 kb on + strand at 526.977 kb on + strand at 526.985 kb on - strand, within BWI76_RS02575 at 526.987 kb on + strand, within BWI76_RS02575
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 523,828 + BWI76_RS02550 0.88 -0.4 523,874 + +0.2 523,946 + +0.0 524,042 + -0.8 524,048 + BWI76_RS02555 0.12 -1.5 524,067 + BWI76_RS02555 0.18 -2.6 524,071 + BWI76_RS02555 0.20 -0.1 524,125 - BWI76_RS02555 0.38 -1.2 524,172 + BWI76_RS02555 0.54 -0.4 524,180 - BWI76_RS02555 0.57 -0.3 524,240 + +0.9 524,240 + BWI76_RS02555 0.78 -0.2 524,240 + BWI76_RS02555 0.78 +0.4 524,248 - BWI76_RS02555 0.80 -0.8 524,259 - BWI76_RS02555 0.84 +0.4 524,361 - +0.5 524,361 - -0.3 524,420 + -0.1 524,486 + -0.1 524,487 + +0.3 524,487 + +0.1 524,487 + -0.1 524,487 + +0.7 524,487 + +2.5 524,487 + -0.7 524,487 + +0.8 524,487 + +0.0 524,487 + -0.3 524,487 + -0.3 524,487 + +0.7 524,487 + +0.0 524,487 + -2.4 524,487 + +0.3 524,487 + -0.9 524,487 + +0.5 524,487 + -0.1 524,487 + +0.2 524,487 + -0.2 524,487 + -0.6 524,487 + +3.3 524,487 + -1.5 524,487 + -0.2 524,487 + -0.3 524,487 + +0.1 524,487 + +0.7 524,487 + +0.1 524,492 + -1.6 524,492 + -0.7 524,492 + -0.2 524,492 + -0.0 524,495 - -0.6 524,495 - +2.2 524,495 - +1.3 524,495 - -1.1 524,495 - +0.3 524,495 - +0.6 524,495 - -0.1 524,495 - -1.1 524,495 - +0.4 524,495 - -0.8 524,495 - +0.3 524,495 - +0.5 524,495 - -0.4 524,495 - -0.1 524,495 - -0.4 524,495 - +0.2 524,495 - +0.6 524,495 - -1.4 524,495 - -0.5 524,495 - +0.1 524,495 - +0.3 524,495 - -0.3 524,495 - -0.5 524,495 - +0.7 524,495 - -0.4 524,495 - +0.7 524,495 - +0.1 524,495 - -0.0 524,495 - +0.1 524,495 - -0.4 524,495 - -0.4 524,495 - +0.8 524,500 - -1.0 524,500 - +0.7 524,500 - +0.1 524,500 - -0.1 524,500 - -0.1 524,500 - +0.2 524,500 - -0.2 524,500 - -0.6 524,555 + BWI76_RS02560 0.16 -0.8 524,555 + BWI76_RS02560 0.16 -1.1 524,556 + BWI76_RS02560 0.17 +0.2 524,564 - BWI76_RS02560 0.21 -0.2 524,580 - BWI76_RS02560 0.29 +0.0 524,585 + BWI76_RS02560 0.31 -0.1 524,721 + -0.5 526,147 - +1.8 526,246 + -0.0 526,319 + BWI76_RS02570 0.11 +2.4 526,322 - BWI76_RS02570 0.12 +0.3 526,429 + BWI76_RS02570 0.37 +0.8 526,429 + BWI76_RS02570 0.37 +1.0 526,437 - BWI76_RS02570 0.38 -0.4 526,437 - BWI76_RS02570 0.38 -1.3 526,460 + BWI76_RS02570 0.44 +0.5 526,517 + BWI76_RS02570 0.57 +0.8 526,580 + BWI76_RS02570 0.72 +0.2 526,635 + BWI76_RS02570 0.85 +0.7 526,715 + -1.2 526,785 - -0.3 526,864 + -0.3 526,977 + -0.2 526,985 - BWI76_RS02575 0.10 -0.9 526,987 + BWI76_RS02575 0.10 -0.9
Or see this region's nucleotide sequence