Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12590

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
2,665,807	+				+0.7
2,665,808	-				-0.1
2,665,808	-				-0.8
2,665,808	-				-2.0
2,665,889	+				+0.2
2,665,889	+				+0.9
2,665,889	+				-1.1
2,665,889	+				-2.3
2,665,890	-				-0.0
2,665,890	-				-0.1
2,665,890	-				+1.0
2,665,890	-				+0.3
2,665,890	-				-2.2
2,665,890	-				+0.9
2,665,890	-				-0.4
2,665,893	+				-0.8
2,665,937	+				-1.7
2,666,058	+				+1.3
2,666,074	+				-0.3
2,666,175	+				+0.6
2,666,175	+				+0.5
2,666,195	-				+3.1
2,666,345	+		ABZR87_RS12590	0.11	+2.8
2,666,345	+		ABZR87_RS12590	0.11	+3.9
2,666,345	+		ABZR87_RS12590	0.11	+2.7
2,666,345	+		ABZR87_RS12590	0.11	+4.7
2,666,346	-		ABZR87_RS12590	0.11	+3.4
2,666,346	-		ABZR87_RS12590	0.11	+3.9
2,666,346	-		ABZR87_RS12590	0.11	+3.5
2,666,346	-		ABZR87_RS12590	0.11	+4.9
2,666,346	-		ABZR87_RS12590	0.11	+3.8
2,666,370	-		ABZR87_RS12590	0.12	+4.6
2,666,370	-		ABZR87_RS12590	0.12	+4.2
2,666,405	+		ABZR87_RS12590	0.15	+3.5
2,666,405	+		ABZR87_RS12590	0.15	+4.5
2,666,405	+		ABZR87_RS12590	0.15	+4.2
2,666,405	+		ABZR87_RS12590	0.15	+3.7
2,666,406	-		ABZR87_RS12590	0.15	+3.5
2,666,406	-		ABZR87_RS12590	0.15	+4.0
2,666,406	-		ABZR87_RS12590	0.15	+3.7
2,666,406	-		ABZR87_RS12590	0.15	+4.8
2,666,406	-		ABZR87_RS12590	0.15	+5.4
2,666,435	+		ABZR87_RS12590	0.17	+3.4
2,666,436	-		ABZR87_RS12590	0.17	+3.8
2,666,436	-		ABZR87_RS12590	0.17	+4.3
2,666,436	-		ABZR87_RS12590	0.17	+4.0
2,666,447	+		ABZR87_RS12590	0.17	+3.8
2,666,448	-		ABZR87_RS12590	0.17	+4.4
2,666,486	+		ABZR87_RS12590	0.20	+4.0
2,666,486	+		ABZR87_RS12590	0.20	+3.6
2,666,486	+		ABZR87_RS12590	0.20	+3.4
2,666,487	-		ABZR87_RS12590	0.20	+4.1
2,666,487	-		ABZR87_RS12590	0.20	+5.2
2,666,492	+		ABZR87_RS12590	0.20	+3.8
2,666,493	-		ABZR87_RS12590	0.20	+4.2
2,666,493	-		ABZR87_RS12590	0.20	+4.6
2,666,549	+		ABZR87_RS12590	0.24	+3.9
2,666,550	-		ABZR87_RS12590	0.24	+5.4
2,666,626	-		ABZR87_RS12590	0.29	+4.2
2,666,939	+		ABZR87_RS12590	0.49	+4.4
2,666,939	+		ABZR87_RS12590	0.49	+3.5
2,666,939	+		ABZR87_RS12590	0.49	+5.1
2,666,939	+		ABZR87_RS12590	0.49	+4.5
2,666,940	-		ABZR87_RS12590	0.49	+4.8
2,666,940	-		ABZR87_RS12590	0.49	+4.1
2,666,940	-		ABZR87_RS12590	0.49	+4.2
2,666,940	-		ABZR87_RS12590	0.49	+4.8
2,666,940	-		ABZR87_RS12590	0.49	+3.3
2,666,940	-		ABZR87_RS12590	0.49	+4.0
2,666,940	-		ABZR87_RS12590	0.49	+4.4
2,666,940	-		ABZR87_RS12590	0.49	+4.7
2,666,979	-		ABZR87_RS12590	0.52	+3.9
2,667,131	+		ABZR87_RS12590	0.62	+5.9
2,667,131	+		ABZR87_RS12590	0.62	+3.5
2,667,131	+		ABZR87_RS12590	0.62	+4.0
2,667,131	+		ABZR87_RS12590	0.62	+3.5
2,667,131	+		ABZR87_RS12590	0.62	+3.0
2,667,131	+		ABZR87_RS12590	0.62	+4.0
2,667,131	+		ABZR87_RS12590	0.62	+4.4
2,667,131	+		ABZR87_RS12590	0.62	+4.8
2,667,131	+		ABZR87_RS12590	0.62	+3.4
2,667,131	+		ABZR87_RS12590	0.62	+3.6
2,667,131	+		ABZR87_RS12590	0.62	+4.9
2,667,131	+		ABZR87_RS12590	0.62	+4.3
2,667,132	-		ABZR87_RS12590	0.62	+4.6
2,667,132	-		ABZR87_RS12590	0.62	+5.7
2,667,132	-		ABZR87_RS12590	0.62	+3.8
2,667,132	-		ABZR87_RS12590	0.62	+4.1
2,667,132	-		ABZR87_RS12590	0.62	+4.1
2,667,132	-		ABZR87_RS12590	0.62	+3.7
2,667,132	-		ABZR87_RS12590	0.62	+4.1
2,667,132	-		ABZR87_RS12590	0.62	+3.9
2,667,132	-		ABZR87_RS12590	0.62	+4.3
2,667,132	-		ABZR87_RS12590	0.62	+4.3
2,667,132	-		ABZR87_RS12590	0.62	+4.6
2,667,132	-		ABZR87_RS12590	0.62	+3.9
2,667,132	-		ABZR87_RS12590	0.62	+4.9
2,667,132	-		ABZR87_RS12590	0.62	+5.0
2,667,132	-		ABZR87_RS12590	0.62	+4.4
2,667,132	-		ABZR87_RS12590	0.62	+4.6
2,667,132	-		ABZR87_RS12590	0.62	+3.5
2,667,132	-		ABZR87_RS12590	0.62	+2.2
2,667,152	+		ABZR87_RS12590	0.63	+3.8
2,667,275	+		ABZR87_RS12590	0.71	+4.2
2,667,275	+		ABZR87_RS12590	0.71	+3.7
2,667,276	-		ABZR87_RS12590	0.71	+3.3
2,667,276	-		ABZR87_RS12590	0.71	+4.2
2,667,276	-		ABZR87_RS12590	0.71	+2.9
2,667,294	-		ABZR87_RS12590	0.73	+3.9
2,667,294	-		ABZR87_RS12590	0.73	+4.2
2,667,310	+		ABZR87_RS12590	0.74	+4.2
2,667,310	+		ABZR87_RS12590	0.74	+2.7
2,667,310	+		ABZR87_RS12590	0.74	+3.5
2,667,310	+		ABZR87_RS12590	0.74	+3.7
2,667,311	-		ABZR87_RS12590	0.74	+3.7
2,667,311	-		ABZR87_RS12590	0.74	+3.2
2,667,311	-		ABZR87_RS12590	0.74	+3.6
2,667,437	+		ABZR87_RS12590	0.82	+3.3
2,667,491	+		ABZR87_RS12590	0.85	+3.3
2,667,491	+		ABZR87_RS12590	0.85	+3.6
2,667,543	-		ABZR87_RS12590	0.89	+4.4
2,667,543	-		ABZR87_RS12590	0.89	+5.2
2,667,543	-		ABZR87_RS12590	0.89	+4.0
2,667,614	+				+2.0
2,667,713	+				+0.3
2,667,713	+				-2.0
2,667,713	+				-0.8
2,667,714	-				-0.1
2,667,714	-				-0.3
2,667,714	-				-0.7
2,667,714	-				+1.4
2,667,717	+				+4.4
2,667,717	+				-0.3
2,667,717	+				-1.0
2,667,718	-				-2.5
2,667,718	-				+3.0
2,667,799	+				-0.2
2,667,799	+				-1.5
2,667,799	+				+1.1
2,667,799	+				-0.5
2,667,799	+				-0.1
2,667,800	-				+0.2
2,667,800	-				+0.2
2,667,800	-				+0.9
2,667,800	-				+0.8
2,667,800	-				+0.5
2,667,800	-				+1.5
2,667,800	-				-0.1
2,667,800	-				+0.2
2,667,966	-		ABZR87_RS12595	0.11	-1.9
2,667,966	-		ABZR87_RS12595	0.11	-0.1
2,667,966	-		ABZR87_RS12595	0.11	+1.1
2,667,966	-		ABZR87_RS12595	0.11	-0.3
2,668,055	+		ABZR87_RS12595	0.17	-1.2
2,668,055	+		ABZR87_RS12595	0.17	-1.0
2,668,055	+		ABZR87_RS12595	0.17	+0.2
2,668,067	+		ABZR87_RS12595	0.18	-0.2
2,668,067	+		ABZR87_RS12595	0.18	-0.8
2,668,067	+		ABZR87_RS12595	0.18	+1.1
2,668,067	+		ABZR87_RS12595	0.18	-0.5
2,668,067	+		ABZR87_RS12595	0.18	-0.5
2,668,067	+		ABZR87_RS12595	0.18	-1.2
2,668,106	+		ABZR87_RS12595	0.20	-0.1
2,668,169	+		ABZR87_RS12595	0.25	-0.0
2,668,170	-		ABZR87_RS12595	0.25	+1.6
2,668,170	-		ABZR87_RS12595	0.25	-0.3
2,668,170	-		ABZR87_RS12595	0.25	+0.2
2,668,170	-		ABZR87_RS12595	0.25	-0.3
2,668,271	+		ABZR87_RS12595	0.31	-0.5
2,668,271	+		ABZR87_RS12595	0.31	-3.0
2,668,432	-		ABZR87_RS12595	0.42	+0.0
2,668,559	+		ABZR87_RS12595	0.50	+1.2
2,668,559	+		ABZR87_RS12595	0.50	-1.6
2,668,559	+		ABZR87_RS12595	0.50	-0.7
2,668,559	+		ABZR87_RS12595	0.50	-0.3
2,668,560	-		ABZR87_RS12595	0.50	+0.2
2,668,560	-		ABZR87_RS12595	0.50	-1.7
2,668,560	-		ABZR87_RS12595	0.50	+0.6
2,668,598	+		ABZR87_RS12595	0.53	+1.0
2,668,599	-		ABZR87_RS12595	0.53	+0.2