Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07140

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,507,565	+		ABZR87_RS07135	0.27	-1.0
1,507,565	+		ABZR87_RS07135	0.27	+0.6
1,507,566	-		ABZR87_RS07135	0.27	-1.1
1,507,615	+		ABZR87_RS07135	0.31	-1.0
1,507,616	-		ABZR87_RS07135	0.31	+1.7
1,507,633	+		ABZR87_RS07135	0.32	+1.5
1,507,634	-		ABZR87_RS07135	0.32	-0.3
1,507,634	-		ABZR87_RS07135	0.32	-0.2
1,507,655	+		ABZR87_RS07135	0.34	+0.9
1,507,655	+		ABZR87_RS07135	0.34	+1.4
1,507,655	+		ABZR87_RS07135	0.34	+0.1
1,507,655	+		ABZR87_RS07135	0.34	-0.1
1,507,656	-		ABZR87_RS07135	0.34	-0.1
1,507,656	-		ABZR87_RS07135	0.34	+0.6
1,507,656	-		ABZR87_RS07135	0.34	+3.4
1,507,656	-		ABZR87_RS07135	0.34	-1.5
1,507,656	-		ABZR87_RS07135	0.34	-0.2
1,507,656	-		ABZR87_RS07135	0.34	-1.1
1,507,656	-		ABZR87_RS07135	0.34	+2.6
1,507,656	-		ABZR87_RS07135	0.34	+0.1
1,507,656	-		ABZR87_RS07135	0.34	-0.1
1,507,656	-		ABZR87_RS07135	0.34	+7.8
1,507,656	-		ABZR87_RS07135	0.34	+1.3
1,507,666	+		ABZR87_RS07135	0.35	-1.5
1,507,666	+		ABZR87_RS07135	0.35	+1.1
1,507,666	+		ABZR87_RS07135	0.35	-0.4
1,507,666	+		ABZR87_RS07135	0.35	-1.3
1,507,667	-		ABZR87_RS07135	0.35	-0.8
1,507,667	-		ABZR87_RS07135	0.35	+1.5
1,507,667	-		ABZR87_RS07135	0.35	-0.6
1,507,667	-		ABZR87_RS07135	0.35	-0.7
1,507,667	-		ABZR87_RS07135	0.35	-0.1
1,507,667	-		ABZR87_RS07135	0.35	+1.2
1,507,670	+		ABZR87_RS07135	0.35	+0.6
1,507,670	+		ABZR87_RS07135	0.35	+0.2
1,507,670	+		ABZR87_RS07135	0.35	-0.3
1,507,670	+		ABZR87_RS07135	0.35	+0.9
1,507,670	+		ABZR87_RS07135	0.35	-0.9
1,507,670	+		ABZR87_RS07135	0.35	+0.0
1,507,670	+		ABZR87_RS07135	0.35	+0.2
1,507,671	-		ABZR87_RS07135	0.35	+1.6
1,507,671	-		ABZR87_RS07135	0.35	+0.9
1,507,671	-		ABZR87_RS07135	0.35	-0.4
1,507,682	+		ABZR87_RS07135	0.36	+0.0
1,507,682	+		ABZR87_RS07135	0.36	+0.1
1,507,683	-		ABZR87_RS07135	0.36	+0.4
1,507,683	-		ABZR87_RS07135	0.36	+0.3
1,507,683	-		ABZR87_RS07135	0.36	+0.2
1,507,710	+		ABZR87_RS07135	0.38	+0.5
1,507,710	+		ABZR87_RS07135	0.38	+0.5
1,507,710	+		ABZR87_RS07135	0.38	-1.1
1,507,710	+		ABZR87_RS07135	0.38	-1.4
1,507,710	+		ABZR87_RS07135	0.38	+0.5
1,507,711	-		ABZR87_RS07135	0.38	-0.4
1,507,711	-		ABZR87_RS07135	0.38	+0.5
1,507,711	-		ABZR87_RS07135	0.38	+0.3
1,507,711	-		ABZR87_RS07135	0.38	+0.2
1,507,747	+		ABZR87_RS07135	0.41	+0.2
1,507,747	+		ABZR87_RS07135	0.41	+0.5
1,507,747	+		ABZR87_RS07135	0.41	-0.3
1,507,748	-		ABZR87_RS07135	0.41	+0.9
1,507,780	+		ABZR87_RS07135	0.43	-2.5
1,507,781	-		ABZR87_RS07135	0.44	-0.0
1,507,781	-		ABZR87_RS07135	0.44	+0.0
1,507,781	-		ABZR87_RS07135	0.44	+0.1
1,507,781	-		ABZR87_RS07135	0.44	+8.9
1,507,885	+		ABZR87_RS07135	0.51	-0.0
1,508,041	+		ABZR87_RS07135	0.63	+0.3
1,508,129	+		ABZR87_RS07135	0.70	-0.7
1,508,129	+		ABZR87_RS07135	0.70	-0.5
1,508,129	+		ABZR87_RS07135	0.70	+0.4
1,508,133	+		ABZR87_RS07135	0.70	-0.1
1,508,133	+		ABZR87_RS07135	0.70	-0.8
1,508,133	+		ABZR87_RS07135	0.70	+0.2
1,508,134	-		ABZR87_RS07135	0.70	+0.7
1,508,153	+		ABZR87_RS07135	0.72	+0.1
1,508,153	+		ABZR87_RS07135	0.72	-0.8
1,508,154	-		ABZR87_RS07135	0.72	-1.0
1,508,155	+		ABZR87_RS07135	0.72	+0.1
1,508,155	+		ABZR87_RS07135	0.72	+2.2
1,508,155	+		ABZR87_RS07135	0.72	+0.3
1,508,155	+		ABZR87_RS07135	0.72	+0.7
1,508,155	+		ABZR87_RS07135	0.72	+1.8
1,508,156	-		ABZR87_RS07135	0.72	+1.2
1,508,156	-		ABZR87_RS07135	0.72	+0.6
1,508,156	-		ABZR87_RS07135	0.72	+1.1
1,508,156	-		ABZR87_RS07135	0.72	+0.3
1,508,182	-		ABZR87_RS07135	0.74	+0.6
1,508,182	-		ABZR87_RS07135	0.74	+1.0
1,508,184	+		ABZR87_RS07135	0.74	+0.4
1,508,188	+		ABZR87_RS07135	0.74	+0.6
1,508,188	+		ABZR87_RS07135	0.74	-1.4
1,508,189	-		ABZR87_RS07135	0.74	+0.8
1,508,189	-		ABZR87_RS07135	0.74	-0.6
1,508,207	+		ABZR87_RS07135	0.76	+1.1
1,508,248	-		ABZR87_RS07135	0.79	+1.1
1,508,303	-		ABZR87_RS07135	0.83	+0.4
1,508,303	-		ABZR87_RS07135	0.83	+0.9
1,508,314	+		ABZR87_RS07135	0.84	+1.9
1,508,314	+		ABZR87_RS07135	0.84	-0.4
1,508,432	+				+0.5
1,508,432	+				+4.8
1,508,433	-				+2.8
1,508,433	-				+0.7
1,508,433	-				-1.4
1,508,433	-				-0.4
1,508,433	-				-0.9
1,508,433	-				-1.0
1,508,434	+				+1.6
1,508,435	-				-0.2
1,508,435	-				-0.9
1,508,476	-				+0.7
1,508,525	+				+1.3
1,508,525	+				-0.5
1,508,525	+				+0.6
1,508,526	-				+1.1
1,508,526	-				-0.2
1,508,526	-				+0.5
1,508,526	-				+1.2
1,508,577	+				+0.2
1,508,577	+				+2.4
1,508,591	+				+1.1
1,508,591	+				+0.1
1,508,592	-				-1.7
1,508,592	-				-0.3
1,508,698	-		ABZR87_RS07140	0.12	-1.2
1,508,698	-		ABZR87_RS07140	0.12	-1.3
1,508,698	-		ABZR87_RS07140	0.12	+2.4
1,508,700	+		ABZR87_RS07140	0.12	-0.0
1,508,700	+		ABZR87_RS07140	0.12	-1.2
1,508,700	+		ABZR87_RS07140	0.12	+0.3
1,508,700	+		ABZR87_RS07140	0.12	+0.9
1,508,700	+		ABZR87_RS07140	0.12	-1.4
1,508,700	+		ABZR87_RS07140	0.12	-0.6
1,508,707	+		ABZR87_RS07140	0.12	-0.0
1,508,736	-		ABZR87_RS07140	0.14	+1.6
1,508,737	+		ABZR87_RS07140	0.14	+0.8
1,508,737	+		ABZR87_RS07140	0.14	+0.6
1,508,737	+		ABZR87_RS07140	0.14	-0.6
1,508,737	+		ABZR87_RS07140	0.14	+0.4
1,508,738	-		ABZR87_RS07140	0.14	+0.7
1,508,738	-		ABZR87_RS07140	0.14	-0.7
1,508,738	-		ABZR87_RS07140	0.14	-0.0
1,508,738	-		ABZR87_RS07140	0.14	+1.0
1,508,738	-		ABZR87_RS07140	0.14	-0.1
1,508,738	-		ABZR87_RS07140	0.14	-1.6
1,508,738	-		ABZR87_RS07140	0.14	+0.3
1,508,738	-		ABZR87_RS07140	0.14	-2.6
1,508,820	+		ABZR87_RS07140	0.19	+0.5
1,508,833	+		ABZR87_RS07140	0.20	+0.3
1,508,833	+		ABZR87_RS07140	0.20	-0.4
1,508,833	+		ABZR87_RS07140	0.20	-0.2
1,508,864	-		ABZR87_RS07140	0.22	+1.4
1,508,866	+		ABZR87_RS07140	0.22	+0.5
1,508,867	-		ABZR87_RS07140	0.22	+0.9
1,508,867	-		ABZR87_RS07140	0.22	-0.5
1,508,875	+		ABZR87_RS07140	0.23	-1.0
1,508,878	+		ABZR87_RS07140	0.23	+1.3
1,508,878	+		ABZR87_RS07140	0.23	-0.5
1,508,879	-		ABZR87_RS07140	0.23	+0.3
1,508,879	-		ABZR87_RS07140	0.23	+0.4
1,509,021	+		ABZR87_RS07140	0.32	+2.9
1,509,021	+		ABZR87_RS07140	0.32	+0.1
1,509,022	-		ABZR87_RS07140	0.32	-1.2
1,509,248	+		ABZR87_RS07140	0.47	-0.6
1,509,273	-		ABZR87_RS07140	0.48	+0.9
1,509,296	-		ABZR87_RS07140	0.50	-1.1
1,509,296	-		ABZR87_RS07140	0.50	+4.0
1,509,631	+		ABZR87_RS07140	0.71	+0.1
1,509,631	+		ABZR87_RS07140	0.71	+0.9
1,509,631	+		ABZR87_RS07140	0.71	-0.3
1,509,632	-		ABZR87_RS07140	0.71	-0.7
1,509,632	-		ABZR87_RS07140	0.71	-1.2
1,509,663	+		ABZR87_RS07140	0.73	-0.9
1,509,663	+		ABZR87_RS07140	0.73	+2.4
1,509,663	+		ABZR87_RS07140	0.73	+0.7
1,509,664	-		ABZR87_RS07140	0.73	+1.0
1,509,688	+		ABZR87_RS07140	0.74	-0.9
1,509,688	+		ABZR87_RS07140	0.74	-1.5
1,509,688	+		ABZR87_RS07140	0.74	-0.5
1,509,689	-		ABZR87_RS07140	0.74	+1.1
1,509,689	-		ABZR87_RS07140	0.74	-1.2
1,509,689	-		ABZR87_RS07140	0.74	-0.4
1,509,689	-		ABZR87_RS07140	0.74	-1.7
1,509,689	-		ABZR87_RS07140	0.74	+1.5
1,509,710	-		ABZR87_RS07140	0.76	-1.5
1,509,788	+		ABZR87_RS07140	0.81	-1.5
1,509,788	+		ABZR87_RS07140	0.81	+1.0
1,509,788	+		ABZR87_RS07140	0.81	+3.8
1,509,788	+		ABZR87_RS07140	0.81	-0.1
1,509,789	-		ABZR87_RS07140	0.81	-1.0
1,509,789	-		ABZR87_RS07140	0.81	-1.2
1,509,789	-		ABZR87_RS07140	0.81	-1.3
1,509,791	+		ABZR87_RS07140	0.81	+1.1
1,509,815	+		ABZR87_RS07140	0.82	+5.0
1,509,816	-		ABZR87_RS07140	0.83	-0.5
1,509,846	+		ABZR87_RS07140	0.84	+0.5
1,509,846	+		ABZR87_RS07140	0.84	-0.2
1,509,847	-		ABZR87_RS07140	0.84	+1.2
1,509,882	+		ABZR87_RS07140	0.87	+0.4
1,509,882	+		ABZR87_RS07140	0.87	-0.2
1,509,883	-		ABZR87_RS07140	0.87	-1.2
1,509,883	-		ABZR87_RS07140	0.87	-3.4
1,509,883	-		ABZR87_RS07140	0.87	+3.2
1,509,940	+				-0.9
1,509,940	+				+0.2
1,509,940	+				-0.5
1,509,940	+				+2.5
1,509,941	-				-0.9
1,509,941	-				+0.7
1,509,941	-				+0.3
1,509,941	-				-0.2
1,509,991	+				-0.1
1,509,991	+				-2.6
1,509,991	+				-0.4
1,509,991	+				+1.0
1,510,099	+				-0.3
1,510,099	+				-0.1
1,510,099	+				-0.1
1,510,099	+				-0.4
1,510,099	+				-1.1
1,510,099	+				-0.3
1,510,099	+				-2.9
1,510,100	-				+0.4
1,510,100	-				-1.2
1,510,116	+				+0.5
1,510,117	-				-0.0
1,510,117	-				+0.7
1,510,117	-				+0.2
1,510,117	-				+0.1
1,510,117	-				-2.4
1,510,117	-				-0.0
1,510,156	+				+0.4
1,510,156	+				+0.0
1,510,156	+				-1.2
1,510,156	+				-1.2
1,510,156	+				+0.9
1,510,156	+				-0.3
1,510,156	+				-0.9
1,510,156	+				+2.2
1,510,157	-				-0.6
1,510,157	-				+1.3
1,510,157	-				+1.0
1,510,171	-				-1.0
1,510,171	-				-0.3
1,510,180	+				+1.2
1,510,180	+				-1.3
1,510,180	+				-0.4
1,510,181	-				-2.7
1,510,181	-				+0.7
1,510,181	-				-0.6
1,510,244	+				+1.4
1,510,246	-				+0.1
1,510,308	+				+1.8
1,510,309	-				+1.1
1,510,315	+				-0.1
1,510,315	+				+0.0
1,510,315	+				-0.6
1,510,315	+				+0.2
1,510,316	-				-0.7
1,510,316	-				-0.4
1,510,316	-				+0.6
1,510,317	-				-0.1
1,510,339	+				+4.4
1,510,339	+				-1.1
1,510,339	+				-1.3
1,510,340	-				-0.4
1,510,340	-				-0.1
1,510,340	-				+0.1
1,510,365	+				+1.6
1,510,366	-				-0.1
1,510,383	-				+0.7
1,510,398	+				+0.0
1,510,398	+				+1.5
1,510,399	-				-0.4
1,510,399	-				+5.6
1,510,399	-				+0.8
1,510,428	+				+0.6
1,510,429	-				+0.2
1,510,429	-				-0.4
1,510,477	+				+0.5
1,510,477	+				-0.2
1,510,477	+				-0.6
1,510,477	+				+0.5
1,510,478	-				+0.4
1,510,478	-				-0.4
1,510,478	-				-0.1
1,510,495	+				-0.9
1,510,496	-				-1.8
1,510,535	+				+0.8
1,510,536	-				-0.1
1,510,609	-				-2.3
1,510,638	+				+0.9
1,510,638	+				-0.5
1,510,664	+				+1.3
1,510,664	+				+0.8
1,510,664	+				-1.3
1,510,664	+				-1.4
1,510,664	+				+0.3
1,510,664	+				+1.1
1,510,665	-				-0.5
1,510,665	-				+0.7
1,510,775	+				-0.1
1,510,775	+				-0.7
1,510,775	+				-0.3
1,510,775	+				+1.3
1,510,776	-				+0.4
1,510,776	-				-0.7
1,510,832	-				-2.2
1,510,865	+				+0.5
1,510,865	+				-1.5
1,510,865	+				-0.8
1,510,866	-				+0.4
1,510,866	-				+1.4
1,510,866	-				+0.5
1,510,866	-				+0.3
1,510,866	-				-2.1
1,510,866	-				-0.5
1,510,866	-				+2.5
1,510,866	-				+1.0
1,510,938	+				-0.2
1,510,938	+				+1.6
1,510,939	-				+0.5
1,510,993	+				+0.4
1,510,993	+				-1.7
1,510,993	+				-0.3
1,510,994	-				+0.9
1,510,994	-				+0.8
1,510,994	-				-0.8
1,510,994	-				-0.3
1,510,994	-				-1.6
1,510,995	+				-0.5
1,510,995	+				-0.1
1,510,996	-				-0.0
1,511,003	+				-1.5
1,511,003	+				-0.8
1,511,003	+				-0.5
1,511,004	-				+0.2
1,511,004	-				+0.3
1,511,004	-				+0.9
1,511,004	-				-0.1
1,511,004	-				+1.0
1,511,004	-				-0.8