Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5038

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
5,812,442	+		Pf6N2E2_5036	0.58	+5.0
5,812,442	+		Pf6N2E2_5036	0.58	+5.2
5,812,442	+		Pf6N2E2_5036	0.58	+5.5
5,812,442	+		Pf6N2E2_5036	0.58	+6.0
5,812,442	+		Pf6N2E2_5036	0.58	+5.6
5,812,443	-		Pf6N2E2_5036	0.59	+4.9
5,812,523	+		Pf6N2E2_5036	0.67	+5.0
5,812,623	+		Pf6N2E2_5036	0.79	+5.3
5,812,623	+		Pf6N2E2_5036	0.79	+4.9
5,812,834	-				-0.1
5,813,048	-		Pf6N2E2_5037	0.49	-2.0
5,813,048	-		Pf6N2E2_5037	0.49	-2.1
5,813,101	+		Pf6N2E2_5037	0.62	+4.9
5,813,101	+		Pf6N2E2_5037	0.62	+5.0
5,813,101	+		Pf6N2E2_5037	0.62	+5.4
5,813,101	+		Pf6N2E2_5037	0.62	+4.6
5,813,102	-		Pf6N2E2_5037	0.62	-1.5
5,813,102	-		Pf6N2E2_5037	0.62	-2.4
5,813,102	-		Pf6N2E2_5037	0.62	-2.8
5,813,179	+		Pf6N2E2_5037	0.80	+5.9
5,813,180	-		Pf6N2E2_5037	0.80	+0.9
5,813,255	+				+4.9
5,813,256	-				+1.1
5,813,261	+				+5.3
5,813,261	+				+4.3
5,813,261	+				+5.3
5,813,262	-				-0.7
5,813,262	-				+1.4
5,813,262	-				-0.2
5,813,262	-				+0.5
5,813,262	-				+0.2
5,813,280	+				+3.9
5,813,280	+				+4.7
5,813,280	+				+5.1
5,813,280	+				+4.1
5,813,281	-				+0.4
5,813,281	-				-1.9
5,813,313	+				+3.3
5,813,314	-				-0.3
5,813,329	-				-3.4
5,813,330	+				+4.0
5,813,330	+				+4.8
5,813,386	-				-2.6
5,813,575	+				+0.5
5,813,709	+		Pf6N2E2_5038	0.14	-1.1
5,813,710	-		Pf6N2E2_5038	0.14	-1.2
5,814,527	+		Pf6N2E2_5038	0.46	+1.0
5,814,840	-		Pf6N2E2_5038	0.59	-0.8
5,814,844	-		Pf6N2E2_5038	0.59	+1.7
5,814,962	+		Pf6N2E2_5038	0.64	-0.8
5,815,079	+		Pf6N2E2_5038	0.68	-0.3
5,815,079	+		Pf6N2E2_5038	0.68	+0.7
5,815,079	+		Pf6N2E2_5038	0.68	+1.4
5,815,079	+		Pf6N2E2_5038	0.68	+0.7
5,815,080	-		Pf6N2E2_5038	0.68	-0.6
5,815,080	-		Pf6N2E2_5038	0.68	+0.4
5,815,138	+		Pf6N2E2_5038	0.71	-1.8
5,815,138	+		Pf6N2E2_5038	0.71	-0.2
5,815,139	-		Pf6N2E2_5038	0.71	+0.9
5,815,139	-		Pf6N2E2_5038	0.71	-1.5
5,815,139	-		Pf6N2E2_5038	0.71	+0.1
5,815,302	+		Pf6N2E2_5038	0.77	-0.4
5,815,302	+		Pf6N2E2_5038	0.77	-0.4
5,815,303	-		Pf6N2E2_5038	0.77	-0.5
5,815,601	+		Pf6N2E2_5038	0.89	-0.5
5,815,602	-		Pf6N2E2_5038	0.89	+0.7
5,815,602	-		Pf6N2E2_5038	0.89	+0.0
5,815,770	-				+1.0
5,815,815	-				+0.6
5,815,867	+				+0.9
5,815,867	+				-1.6
5,815,868	-				-0.7
5,815,975	+				+0.9
5,815,976	-				+0.1
5,815,976	-				+0.4
5,816,022	+		Pf6N2E2_5039	0.10	-1.3
5,816,022	+		Pf6N2E2_5039	0.10	-2.4
5,816,023	-		Pf6N2E2_5039	0.10	-0.7
5,816,032	-		Pf6N2E2_5039	0.11	+0.8
5,816,032	-		Pf6N2E2_5039	0.11	+1.1
5,816,041	+		Pf6N2E2_5039	0.12	-0.8
5,816,139	+		Pf6N2E2_5039	0.21	-1.2
5,816,139	+		Pf6N2E2_5039	0.21	+0.4
5,816,140	-		Pf6N2E2_5039	0.21	-0.3
5,816,228	+		Pf6N2E2_5039	0.29	-0.8
5,816,229	-		Pf6N2E2_5039	0.29	-1.1
5,816,278	+		Pf6N2E2_5039	0.34	-0.5
5,816,279	-		Pf6N2E2_5039	0.34	+0.8
5,816,394	+		Pf6N2E2_5039	0.45	-1.0
5,816,394	+		Pf6N2E2_5039	0.45	-1.2
5,816,394	+		Pf6N2E2_5039	0.45	-2.1
5,816,394	+		Pf6N2E2_5039	0.45	-0.9
5,816,394	+		Pf6N2E2_5039	0.45	-0.6
5,816,394	+		Pf6N2E2_5039	0.45	-0.3
5,816,394	+		Pf6N2E2_5039	0.45	+1.4
5,816,395	-		Pf6N2E2_5039	0.45	+0.6
5,816,395	-		Pf6N2E2_5039	0.45	+1.7
5,816,395	-		Pf6N2E2_5039	0.45	+1.2
5,816,790	+		Pf6N2E2_5039	0.81	-0.2
5,816,791	-		Pf6N2E2_5039	0.81	+0.2