Experiment: Nickel (II) chloride 0.0025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_376 and Pf6N2E2_377 are separated by 299 nucleotides Pf6N2E2_377 and Pf6N2E2_378 are separated by 486 nucleotides Pf6N2E2_378 and Pf6N2E2_379 are separated by 161 nucleotides
Pf6N2E2_376 - Similar to non-heme chloroperoxidase, sll5080 homolog, at 443,495 to 444,448
_376
Pf6N2E2_377 - hypothetical protein, at 444,748 to 444,948
_377
Pf6N2E2_378 - hypothetical protein, at 445,435 to 445,587
_378
Pf6N2E2_379 - hypothetical protein, at 445,749 to 446,549
_379
Position (kb) 444
445 Strain fitness (log2 ratio) -2
-1
0
1
2 at 443.820 kb on + strand, within Pf6N2E2_376 at 443.820 kb on + strand, within Pf6N2E2_376 at 443.854 kb on - strand, within Pf6N2E2_376 at 444.009 kb on + strand, within Pf6N2E2_376 at 444.009 kb on + strand, within Pf6N2E2_376 at 444.009 kb on + strand, within Pf6N2E2_376 at 444.102 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.285 kb on + strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.286 kb on - strand, within Pf6N2E2_376 at 444.288 kb on + strand, within Pf6N2E2_376 at 444.288 kb on + strand, within Pf6N2E2_376 at 444.288 kb on + strand, within Pf6N2E2_376 at 444.289 kb on - strand, within Pf6N2E2_376 at 444.318 kb on + strand, within Pf6N2E2_376 at 444.318 kb on + strand, within Pf6N2E2_376 at 444.318 kb on + strand, within Pf6N2E2_376 at 444.319 kb on - strand, within Pf6N2E2_376 at 444.516 kb on - strand at 444.516 kb on - strand at 444.563 kb on - strand at 444.647 kb on + strand at 444.712 kb on - strand at 444.809 kb on + strand, within Pf6N2E2_377 at 444.809 kb on + strand, within Pf6N2E2_377 at 444.809 kb on + strand, within Pf6N2E2_377 at 444.922 kb on + strand, within Pf6N2E2_377 at 445.204 kb on + strand at 445.205 kb on - strand at 445.238 kb on + strand at 445.270 kb on - strand at 445.270 kb on - strand at 445.423 kb on + strand at 445.423 kb on + strand at 445.424 kb on - strand at 445.424 kb on - strand at 445.424 kb on - strand at 445.424 kb on - strand at 445.424 kb on - strand at 445.716 kb on - strand at 445.750 kb on + strand at 445.750 kb on + strand at 445.750 kb on + strand at 445.751 kb on - strand at 445.751 kb on - strand at 445.753 kb on + strand at 445.754 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.0025 M remove 443,820 + Pf6N2E2_376 0.34 -0.2 443,820 + Pf6N2E2_376 0.34 -1.6 443,854 - Pf6N2E2_376 0.38 -0.1 444,009 + Pf6N2E2_376 0.54 -0.8 444,009 + Pf6N2E2_376 0.54 +1.7 444,009 + Pf6N2E2_376 0.54 +0.3 444,102 + Pf6N2E2_376 0.64 +1.3 444,285 + Pf6N2E2_376 0.83 +0.7 444,285 + Pf6N2E2_376 0.83 -0.6 444,285 + Pf6N2E2_376 0.83 +0.5 444,285 + Pf6N2E2_376 0.83 -0.2 444,285 + Pf6N2E2_376 0.83 +0.5 444,285 + Pf6N2E2_376 0.83 -0.1 444,286 - Pf6N2E2_376 0.83 -0.0 444,286 - Pf6N2E2_376 0.83 -1.4 444,286 - Pf6N2E2_376 0.83 -0.4 444,286 - Pf6N2E2_376 0.83 +0.9 444,286 - Pf6N2E2_376 0.83 +1.2 444,286 - Pf6N2E2_376 0.83 +0.5 444,286 - Pf6N2E2_376 0.83 -0.2 444,286 - Pf6N2E2_376 0.83 -0.0 444,286 - Pf6N2E2_376 0.83 +0.3 444,288 + Pf6N2E2_376 0.83 -0.4 444,288 + Pf6N2E2_376 0.83 +0.5 444,288 + Pf6N2E2_376 0.83 +1.6 444,289 - Pf6N2E2_376 0.83 +1.8 444,318 + Pf6N2E2_376 0.86 -0.2 444,318 + Pf6N2E2_376 0.86 -0.4 444,318 + Pf6N2E2_376 0.86 -0.2 444,319 - Pf6N2E2_376 0.86 -0.6 444,516 - -0.6 444,516 - +2.5 444,563 - +0.0 444,647 + -0.1 444,712 - -1.1 444,809 + Pf6N2E2_377 0.30 -0.1 444,809 + Pf6N2E2_377 0.30 +0.6 444,809 + Pf6N2E2_377 0.30 +0.6 444,922 + Pf6N2E2_377 0.87 +1.6 445,204 + +1.2 445,205 - +0.2 445,238 + -0.5 445,270 - +0.3 445,270 - -0.2 445,423 + +1.4 445,423 + +1.1 445,424 - +0.1 445,424 - +1.6 445,424 - +1.3 445,424 - +2.1 445,424 - -0.3 445,716 - +0.3 445,750 + +0.7 445,750 + -2.1 445,750 + +0.5 445,751 - -0.0 445,751 - +0.1 445,753 + +0.6 445,754 - +0.1
Or see this region's nucleotide sequence