Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3315

Experiment: Nickel (II) chloride 0.0025 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.0025 M
3,828,919	+		Pf6N2E2_3314	0.37	-0.4
3,828,919	+		Pf6N2E2_3314	0.37	-0.6
3,828,920	-		Pf6N2E2_3314	0.37	-0.7
3,828,920	-		Pf6N2E2_3314	0.37	+1.1
3,829,175	+		Pf6N2E2_3314	0.63	-0.0
3,829,175	+		Pf6N2E2_3314	0.63	-0.1
3,829,176	-		Pf6N2E2_3314	0.63	+0.4
3,829,176	-		Pf6N2E2_3314	0.63	-1.3
3,829,206	+		Pf6N2E2_3314	0.66	-1.0
3,829,206	+		Pf6N2E2_3314	0.66	-1.8
3,829,206	+		Pf6N2E2_3314	0.66	+0.0
3,829,207	-		Pf6N2E2_3314	0.66	+1.0
3,829,207	-		Pf6N2E2_3314	0.66	-0.0
3,829,238	+		Pf6N2E2_3314	0.69	+0.1
3,829,238	+		Pf6N2E2_3314	0.69	+0.1
3,829,239	-		Pf6N2E2_3314	0.70	-0.5
3,829,239	-		Pf6N2E2_3314	0.70	-0.7
3,829,239	-		Pf6N2E2_3314	0.70	+0.6
3,829,239	-		Pf6N2E2_3314	0.70	+0.3
3,829,280	+		Pf6N2E2_3314	0.74	-0.4
3,829,281	-		Pf6N2E2_3314	0.74	+1.5
3,829,281	-		Pf6N2E2_3314	0.74	+0.2
3,829,281	-		Pf6N2E2_3314	0.74	-1.3
3,829,281	-		Pf6N2E2_3314	0.74	-0.5
3,829,302	-		Pf6N2E2_3314	0.76	+0.2
3,829,302	-		Pf6N2E2_3314	0.76	-0.7
3,829,302	-		Pf6N2E2_3314	0.76	+0.7
3,829,506	-				-1.2
3,829,536	-				+0.2
3,829,551	+				+0.5
3,829,552	-				-0.4
3,829,672	+				+0.5
3,829,673	-				+0.8
3,829,774	+				+0.9
3,829,774	+				+0.4
3,829,774	+				+1.5
3,829,774	+				-0.1
3,829,775	-				-0.0
3,829,775	-				+0.6
3,829,775	-				-0.1
3,829,828	+				+0.4
3,829,829	-				-0.4
3,829,849	-				+0.3
3,829,979	+		Pf6N2E2_3315	0.25	+0.5
3,829,988	-		Pf6N2E2_3315	0.27	+0.8
3,830,020	+		Pf6N2E2_3315	0.35	-2.1
3,830,023	-		Pf6N2E2_3315	0.35	+0.7
3,830,109	+		Pf6N2E2_3315	0.55	-0.6
3,830,110	-		Pf6N2E2_3315	0.55	-0.6
3,830,128	+		Pf6N2E2_3315	0.59	-0.3
3,830,128	+		Pf6N2E2_3315	0.59	+0.8
3,830,128	+		Pf6N2E2_3315	0.59	-1.8
3,830,128	+		Pf6N2E2_3315	0.59	-1.2
3,830,129	-		Pf6N2E2_3315	0.59	+0.4
3,830,129	-		Pf6N2E2_3315	0.59	+0.3
3,830,129	-		Pf6N2E2_3315	0.59	+0.3
3,830,366	+				-1.3
3,830,366	+				-1.5
3,830,366	+				+1.1
3,830,367	-				+0.1
3,830,367	-				+0.5
3,830,367	-				-0.5
3,830,498	+				-1.6
3,830,499	-				-1.2
3,830,499	-				-0.4
3,830,609	+		Pf6N2E2_3316	0.11	-0.6
3,830,609	+		Pf6N2E2_3316	0.11	-0.3
3,830,609	+		Pf6N2E2_3316	0.11	+1.2
3,830,609	+		Pf6N2E2_3316	0.11	-0.8
3,830,610	-		Pf6N2E2_3316	0.11	-0.4
3,830,610	-		Pf6N2E2_3316	0.11	-0.8
3,830,610	-		Pf6N2E2_3316	0.11	-0.6
3,830,610	-		Pf6N2E2_3316	0.11	-0.0
3,830,647	+		Pf6N2E2_3316	0.13	+0.0
3,830,647	+		Pf6N2E2_3316	0.13	-0.9
3,830,647	+		Pf6N2E2_3316	0.13	-1.7
3,830,647	+		Pf6N2E2_3316	0.13	+1.4
3,830,648	-		Pf6N2E2_3316	0.13	+0.5
3,830,648	-		Pf6N2E2_3316	0.13	+0.8
3,830,648	-		Pf6N2E2_3316	0.13	+0.6
3,830,648	-		Pf6N2E2_3316	0.13	+0.9
3,830,648	-		Pf6N2E2_3316	0.13	-0.7
3,830,648	-		Pf6N2E2_3316	0.13	-0.7
3,830,648	-		Pf6N2E2_3316	0.13	+0.4
3,830,666	+		Pf6N2E2_3316	0.13	+0.8
3,830,667	-		Pf6N2E2_3316	0.13	-1.0
3,830,667	-		Pf6N2E2_3316	0.13	-1.4
3,830,667	-		Pf6N2E2_3316	0.13	-2.6
3,830,667	-		Pf6N2E2_3316	0.13	+0.6
3,830,844	+		Pf6N2E2_3316	0.21	+0.2
3,831,121	-		Pf6N2E2_3316	0.34	-0.9
3,831,123	+		Pf6N2E2_3316	0.34	-1.6
3,831,123	+		Pf6N2E2_3316	0.34	-0.2
3,831,123	+		Pf6N2E2_3316	0.34	+1.4
3,831,123	+		Pf6N2E2_3316	0.34	-0.6
3,831,124	-		Pf6N2E2_3316	0.34	-2.7
3,831,124	-		Pf6N2E2_3316	0.34	+0.6
3,831,124	-		Pf6N2E2_3316	0.34	+1.1
3,831,152	+		Pf6N2E2_3316	0.35	-0.2
3,831,152	+		Pf6N2E2_3316	0.35	+0.8
3,831,153	-		Pf6N2E2_3316	0.35	+0.4
3,831,153	-		Pf6N2E2_3316	0.35	-0.6
3,831,296	+		Pf6N2E2_3316	0.42	-0.0
3,831,297	-		Pf6N2E2_3316	0.42	+1.4
3,831,297	-		Pf6N2E2_3316	0.42	-2.0