Strain Fitness in Pantoea sp. MT58 around IAI47_06655

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,384,957	+		IAI47_06650	0.17	+0.7
1,385,039	+		IAI47_06650	0.25	+0.5
1,385,039	+		IAI47_06650	0.25	+1.5
1,385,039	+		IAI47_06650	0.25	-0.5
1,385,039	+		IAI47_06650	0.25	+1.9
1,385,039	+		IAI47_06650	0.25	+1.7
1,385,039	+		IAI47_06650	0.25	+1.5
1,385,039	+		IAI47_06650	0.25	-0.8
1,385,039	+		IAI47_06650	0.25	-1.0
1,385,039	+		IAI47_06650	0.25	+2.1
1,385,040	-		IAI47_06650	0.25	+0.2
1,385,040	-		IAI47_06650	0.25	-0.3
1,385,040	-		IAI47_06650	0.25	-2.8
1,385,040	-		IAI47_06650	0.25	-1.5
1,385,040	-		IAI47_06650	0.25	+0.7
1,385,040	-		IAI47_06650	0.25	-2.6
1,385,085	+		IAI47_06650	0.29	-0.9
1,385,086	-		IAI47_06650	0.29	-0.6
1,385,217	+		IAI47_06650	0.40	-0.5
1,385,217	+		IAI47_06650	0.40	+0.4
1,385,217	+		IAI47_06650	0.40	+0.2
1,385,218	-		IAI47_06650	0.40	-0.7
1,385,221	+		IAI47_06650	0.41	+1.6
1,385,221	+		IAI47_06650	0.41	-0.3
1,385,221	+		IAI47_06650	0.41	+1.5
1,385,221	+		IAI47_06650	0.41	+3.9
1,385,222	-		IAI47_06650	0.41	-3.0
1,385,309	+		IAI47_06650	0.49	+0.5
1,385,309	+		IAI47_06650	0.49	+2.1
1,385,309	+		IAI47_06650	0.49	-0.9
1,385,310	-		IAI47_06650	0.49	-1.6
1,385,457	+		IAI47_06650	0.62	-0.6
1,385,457	+		IAI47_06650	0.62	+2.8
1,385,457	+		IAI47_06650	0.62	+4.1
1,385,504	+		IAI47_06650	0.66	+0.9
1,385,504	+		IAI47_06650	0.66	+1.2
1,385,504	+		IAI47_06650	0.66	+0.2
1,385,517	+		IAI47_06650	0.67	+1.4
1,385,517	+		IAI47_06650	0.67	+0.1
1,385,548	+		IAI47_06650	0.70	+6.4
1,385,548	+		IAI47_06650	0.70	+1.0
1,385,570	+		IAI47_06650	0.72	+0.6
1,385,571	-		IAI47_06650	0.72	-1.6
1,385,571	-		IAI47_06650	0.72	-0.3
1,385,630	-		IAI47_06650	0.77	-0.9
1,385,682	+		IAI47_06650	0.82	+1.8
1,385,682	+		IAI47_06650	0.82	+2.6
1,385,683	-		IAI47_06650	0.82	-1.5
1,385,735	-		IAI47_06650	0.86	-1.6
1,385,735	-		IAI47_06650	0.86	+0.7
1,385,926	+				-0.1
1,385,927	-				-2.7
1,385,927	-				+0.7
1,385,927	-				-1.0
1,385,941	+				+1.5
1,385,941	+				-0.5
1,385,941	+				+1.7
1,385,941	+				-1.1
1,385,941	+				+0.4
1,385,942	-				-1.1
1,385,942	-				-0.9
1,385,942	-				-2.1
1,385,944	-				-1.1
1,385,944	-				-3.4
1,386,024	+		IAI47_06655	0.15	+1.8
1,386,024	+		IAI47_06655	0.15	-1.3
1,386,024	+		IAI47_06655	0.15	-0.1
1,386,024	+		IAI47_06655	0.15	-1.3
1,386,159	+		IAI47_06655	0.29	-1.6
1,386,162	+		IAI47_06655	0.29	+0.9
1,386,163	-		IAI47_06655	0.29	-0.1
1,386,250	-		IAI47_06655	0.39	-2.4
1,386,360	+		IAI47_06655	0.50	+0.1
1,386,361	-		IAI47_06655	0.50	-3.5
1,386,606	+		IAI47_06655	0.77	+0.5
1,386,607	-		IAI47_06655	0.77	-1.6
1,386,673	+		IAI47_06655	0.84	-1.1
1,386,774	+				+1.1
1,386,774	+				-2.3
1,386,774	+				+1.2
1,386,775	-				-1.9
1,386,809	+				-0.2
1,386,809	+				+0.8
1,386,809	+				-0.1
1,386,809	+				-0.9
1,386,810	-				-2.6
1,386,810	-				-0.3
1,386,810	-				-1.1
1,386,841	-				-1.5
1,386,841	-				-0.3
1,386,859	+				+0.1
1,386,860	-				-1.5
1,386,868	+				+0.7
1,386,868	+				+1.7
1,386,869	-				-1.3
1,386,869	-				-0.8
1,386,869	-				-1.1
1,386,890	+				-0.8
1,386,890	+				-0.6
1,386,890	+				-0.9
1,386,890	+				-0.4
1,386,890	+				+0.0
1,386,890	+				+0.4
1,386,890	+				+1.5
1,386,890	+				+0.2
1,386,891	-				-0.6
1,386,891	-				-2.3
1,386,891	-				+0.5
1,386,891	-				+0.1
1,386,891	-				+0.3
1,386,891	-				-1.0
1,386,891	-				-1.4
1,386,891	-				-2.9
1,386,891	-				-1.6
1,386,892	+				+0.5
1,386,892	+				-1.0
1,386,892	+				+2.9
1,386,892	+				+1.1
1,386,892	+				+1.2
1,386,893	-				-1.3
1,386,893	-				+0.2
1,386,893	-				-0.1
1,386,985	+				-1.8
1,387,040	-		IAI47_06660	0.12	+0.3
1,387,097	-		IAI47_06660	0.15	+0.1
1,387,225	+		IAI47_06660	0.22	-1.1
1,387,225	+		IAI47_06660	0.22	+0.1
1,387,226	-		IAI47_06660	0.22	-0.1
1,387,226	-		IAI47_06660	0.22	-0.1
1,387,241	-		IAI47_06660	0.23	+0.4
1,387,241	-		IAI47_06660	0.23	-1.6
1,387,241	-		IAI47_06660	0.23	+0.7
1,387,406	+		IAI47_06660	0.33	-0.3
1,387,406	+		IAI47_06660	0.33	-1.1
1,387,406	+		IAI47_06660	0.33	-0.9
1,387,457	-		IAI47_06660	0.36	+0.1
1,387,481	+		IAI47_06660	0.37	+2.4
1,387,481	+		IAI47_06660	0.37	+0.7
1,387,481	+		IAI47_06660	0.37	+1.7
1,387,482	-		IAI47_06660	0.37	-1.2
1,387,482	-		IAI47_06660	0.37	-0.1
1,387,483	+		IAI47_06660	0.37	+1.3
1,387,483	+		IAI47_06660	0.37	+1.9
1,387,483	+		IAI47_06660	0.37	+0.9
1,387,483	+		IAI47_06660	0.37	-0.1
1,387,483	+		IAI47_06660	0.37	+2.4
1,387,483	+		IAI47_06660	0.37	+2.1
1,387,483	+		IAI47_06660	0.37	+0.5
1,387,483	+		IAI47_06660	0.37	+1.0
1,387,483	+		IAI47_06660	0.37	+0.2
1,387,483	+		IAI47_06660	0.37	-0.8
1,387,483	+		IAI47_06660	0.37	+1.5
1,387,483	+		IAI47_06660	0.37	+0.7
1,387,483	+		IAI47_06660	0.37	+0.8
1,387,483	+		IAI47_06660	0.37	+2.0
1,387,484	-		IAI47_06660	0.37	-2.0
1,387,484	-		IAI47_06660	0.37	-1.1
1,387,484	-		IAI47_06660	0.37	+0.3
1,387,484	-		IAI47_06660	0.37	-0.6
1,387,484	-		IAI47_06660	0.37	+1.2
1,387,484	-		IAI47_06660	0.37	-0.5
1,387,484	-		IAI47_06660	0.37	-0.2
1,387,484	-		IAI47_06660	0.37	+0.4
1,387,484	-		IAI47_06660	0.37	+1.1
1,387,484	-		IAI47_06660	0.37	-2.9
1,387,510	+		IAI47_06660	0.39	-2.0
1,387,510	+		IAI47_06660	0.39	-0.7
1,387,511	-		IAI47_06660	0.39	-2.2
1,387,511	-		IAI47_06660	0.39	-1.7
1,387,511	-		IAI47_06660	0.39	-0.9
1,387,511	-		IAI47_06660	0.39	+0.2
1,387,574	+		IAI47_06660	0.43	+0.7
1,387,574	+		IAI47_06660	0.43	-0.3
1,387,574	+		IAI47_06660	0.43	-0.6
1,387,574	+		IAI47_06660	0.43	-1.1
1,387,575	-		IAI47_06660	0.43	-2.2
1,387,575	-		IAI47_06660	0.43	-0.6
1,387,575	-		IAI47_06660	0.43	+0.1
1,387,575	-		IAI47_06660	0.43	-0.1
1,387,575	-		IAI47_06660	0.43	-2.2
1,387,634	-		IAI47_06660	0.46	+0.4
1,387,634	-		IAI47_06660	0.46	+0.4
1,387,645	+		IAI47_06660	0.47	-0.5
1,387,646	-		IAI47_06660	0.47	+0.1
1,387,714	-		IAI47_06660	0.51	-0.4
1,387,714	-		IAI47_06660	0.51	+0.7
1,387,733	-		IAI47_06660	0.52	+0.5
1,387,733	-		IAI47_06660	0.52	-2.4
1,387,786	+		IAI47_06660	0.55	+0.8
1,387,787	-		IAI47_06660	0.55	+0.1
1,387,818	+		IAI47_06660	0.57	+1.2
1,387,818	+		IAI47_06660	0.57	-1.1
1,387,818	+		IAI47_06660	0.57	+0.3
1,387,825	+		IAI47_06660	0.57	+0.1