Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23095 and HSERO_RS23100 are separated by 6 nucleotides HSERO_RS23100 and HSERO_RS23105 overlap by 4 nucleotides HSERO_RS23105 and HSERO_RS23110 are separated by 67 nucleotides
HSERO_RS23095: HSERO_RS23095 - histidine kinase, at 5,304,163 to 5,305,041
_RS23095
HSERO_RS23100: HSERO_RS23100 - hypothetical protein, at 5,305,048 to 5,305,944
_RS23100
HSERO_RS23105: HSERO_RS23105 - hypothetical protein, at 5,305,941 to 5,306,870
_RS23105
HSERO_RS23110: HSERO_RS23110 - cytochrome C, at 5,306,938 to 5,307,255
_RS23110
Position (kb) 5305
5306 Strain fitness (log2 ratio) -1
0
1
2 at 5304.137 kb on + strand at 5304.251 kb on + strand, within HSERO_RS23095 at 5304.259 kb on - strand, within HSERO_RS23095 at 5304.371 kb on + strand, within HSERO_RS23095 at 5304.440 kb on - strand, within HSERO_RS23095 at 5304.804 kb on + strand, within HSERO_RS23095 at 5304.980 kb on - strand at 5305.036 kb on + strand at 5305.044 kb on - strand at 5305.067 kb on - strand at 5305.413 kb on + strand, within HSERO_RS23100 at 5305.558 kb on - strand, within HSERO_RS23100 at 5305.630 kb on - strand, within HSERO_RS23100 at 5305.647 kb on + strand, within HSERO_RS23100 at 5305.851 kb on + strand, within HSERO_RS23100 at 5305.888 kb on + strand at 5305.924 kb on + strand at 5305.929 kb on + strand at 5305.932 kb on - strand at 5305.952 kb on + strand at 5306.034 kb on + strand, within HSERO_RS23105 at 5306.034 kb on + strand, within HSERO_RS23105 at 5306.034 kb on + strand, within HSERO_RS23105 at 5306.129 kb on + strand, within HSERO_RS23105 at 5306.149 kb on + strand, within HSERO_RS23105 at 5306.211 kb on - strand, within HSERO_RS23105 at 5306.296 kb on + strand, within HSERO_RS23105 at 5306.331 kb on + strand, within HSERO_RS23105 at 5306.364 kb on + strand, within HSERO_RS23105 at 5306.376 kb on + strand, within HSERO_RS23105 at 5306.384 kb on - strand, within HSERO_RS23105 at 5306.384 kb on - strand, within HSERO_RS23105 at 5306.399 kb on + strand, within HSERO_RS23105 at 5306.428 kb on - strand, within HSERO_RS23105 at 5306.428 kb on - strand, within HSERO_RS23105 at 5306.494 kb on - strand, within HSERO_RS23105 at 5306.596 kb on - strand, within HSERO_RS23105 at 5306.694 kb on - strand, within HSERO_RS23105 at 5306.710 kb on - strand, within HSERO_RS23105 at 5306.798 kb on + strand at 5306.806 kb on - strand at 5306.861 kb on + strand at 5306.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 5,304,137 + +0.2 5,304,251 + HSERO_RS23095 0.10 -0.4 5,304,259 - HSERO_RS23095 0.11 +0.1 5,304,371 + HSERO_RS23095 0.24 +2.4 5,304,440 - HSERO_RS23095 0.32 +0.3 5,304,804 + HSERO_RS23095 0.73 +0.3 5,304,980 - +0.3 5,305,036 + -0.2 5,305,044 - -0.3 5,305,067 - +0.3 5,305,413 + HSERO_RS23100 0.41 +0.3 5,305,558 - HSERO_RS23100 0.57 +1.0 5,305,630 - HSERO_RS23100 0.65 +1.0 5,305,647 + HSERO_RS23100 0.67 +0.2 5,305,851 + HSERO_RS23100 0.90 -0.1 5,305,888 + -0.1 5,305,924 + +1.5 5,305,929 + -0.3 5,305,932 - +1.5 5,305,952 + -0.7 5,306,034 + HSERO_RS23105 0.10 -0.3 5,306,034 + HSERO_RS23105 0.10 +0.6 5,306,034 + HSERO_RS23105 0.10 +0.5 5,306,129 + HSERO_RS23105 0.20 +0.3 5,306,149 + HSERO_RS23105 0.22 -1.1 5,306,211 - HSERO_RS23105 0.29 -0.7 5,306,296 + HSERO_RS23105 0.38 +0.5 5,306,331 + HSERO_RS23105 0.42 +0.1 5,306,364 + HSERO_RS23105 0.45 +0.5 5,306,376 + HSERO_RS23105 0.47 -0.5 5,306,384 - HSERO_RS23105 0.48 -0.1 5,306,384 - HSERO_RS23105 0.48 +1.9 5,306,399 + HSERO_RS23105 0.49 -0.3 5,306,428 - HSERO_RS23105 0.52 +0.1 5,306,428 - HSERO_RS23105 0.52 +0.6 5,306,494 - HSERO_RS23105 0.59 -0.6 5,306,596 - HSERO_RS23105 0.70 +0.1 5,306,694 - HSERO_RS23105 0.81 +0.3 5,306,710 - HSERO_RS23105 0.83 -0.2 5,306,798 + -0.1 5,306,806 - +0.4 5,306,861 + -1.6 5,306,924 + +0.4
Or see this region's nucleotide sequence