Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22700 and HSERO_RS22705 are separated by 202 nucleotides HSERO_RS22705 and HSERO_RS22710 are separated by 7 nucleotides HSERO_RS22710 and HSERO_RS22715 are separated by 61 nucleotides
HSERO_RS22700: HSERO_RS22700 - methyl-accepting chemotaxis protein, at 5,206,342 to 5,208,138
_RS22700
HSERO_RS22705: HSERO_RS22705 - heme oxygenase, at 5,208,341 to 5,208,931
_RS22705
HSERO_RS22710: HSERO_RS22710 - hypothetical protein, at 5,208,939 to 5,209,379
_RS22710
HSERO_RS22715: HSERO_RS22715 - aldo/keto reductase, at 5,209,441 to 5,210,475
_RS22715
Position (kb) 5208
5209
5210 Strain fitness (log2 ratio) -1
0
1
2 at 5207.962 kb on + strand at 5207.967 kb on + strand at 5207.977 kb on + strand at 5208.054 kb on + strand at 5208.061 kb on - strand at 5208.112 kb on - strand at 5208.246 kb on + strand at 5208.382 kb on + strand at 5208.382 kb on + strand at 5208.390 kb on - strand at 5208.444 kb on - strand, within HSERO_RS22705 at 5208.450 kb on - strand, within HSERO_RS22705 at 5208.450 kb on - strand, within HSERO_RS22705 at 5208.450 kb on - strand, within HSERO_RS22705 at 5208.495 kb on - strand, within HSERO_RS22705 at 5208.777 kb on + strand, within HSERO_RS22705 at 5208.802 kb on - strand, within HSERO_RS22705 at 5208.854 kb on - strand, within HSERO_RS22705 at 5208.856 kb on - strand, within HSERO_RS22705 at 5208.946 kb on + strand at 5209.138 kb on + strand, within HSERO_RS22710 at 5209.222 kb on - strand at 5209.300 kb on - strand, within HSERO_RS22710 at 5209.316 kb on - strand, within HSERO_RS22710 at 5209.320 kb on + strand, within HSERO_RS22710 at 5209.632 kb on - strand, within HSERO_RS22715 at 5209.766 kb on + strand, within HSERO_RS22715 at 5210.078 kb on - strand, within HSERO_RS22715 at 5210.080 kb on + strand, within HSERO_RS22715 at 5210.088 kb on - strand, within HSERO_RS22715 at 5210.088 kb on - strand, within HSERO_RS22715 at 5210.093 kb on - strand, within HSERO_RS22715 at 5210.331 kb on - strand, within HSERO_RS22715
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 5,207,962 + +0.8 5,207,967 + +0.3 5,207,977 + -0.8 5,208,054 + +0.4 5,208,061 - -0.4 5,208,112 - -0.3 5,208,246 + -0.4 5,208,382 + +0.2 5,208,382 + +0.2 5,208,390 - +0.6 5,208,444 - HSERO_RS22705 0.17 -0.4 5,208,450 - HSERO_RS22705 0.18 +0.1 5,208,450 - HSERO_RS22705 0.18 +0.7 5,208,450 - HSERO_RS22705 0.18 +1.0 5,208,495 - HSERO_RS22705 0.26 -0.2 5,208,777 + HSERO_RS22705 0.74 +1.0 5,208,802 - HSERO_RS22705 0.78 -0.1 5,208,854 - HSERO_RS22705 0.87 -0.3 5,208,856 - HSERO_RS22705 0.87 -0.6 5,208,946 + +0.1 5,209,138 + HSERO_RS22710 0.45 +0.8 5,209,222 - +2.0 5,209,300 - HSERO_RS22710 0.82 -0.4 5,209,316 - HSERO_RS22710 0.85 +0.6 5,209,320 + HSERO_RS22710 0.86 +0.6 5,209,632 - HSERO_RS22715 0.18 +0.4 5,209,766 + HSERO_RS22715 0.31 +0.7 5,210,078 - HSERO_RS22715 0.62 -0.4 5,210,080 + HSERO_RS22715 0.62 +0.3 5,210,088 - HSERO_RS22715 0.63 +0.1 5,210,088 - HSERO_RS22715 0.63 -0.3 5,210,093 - HSERO_RS22715 0.63 +0.9 5,210,331 - HSERO_RS22715 0.86 -0.2
Or see this region's nucleotide sequence