Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08705 and HSERO_RS08710 are separated by 202 nucleotides HSERO_RS08710 and HSERO_RS08715 are separated by 2 nucleotides HSERO_RS08715 and HSERO_RS08720 are separated by 19 nucleotides
HSERO_RS08705: HSERO_RS08705 - 2-aminoadipate aminotransferase, at 1,974,023 to 1,975,561
_RS08705
HSERO_RS08710: HSERO_RS08710 - methyltransferase, at 1,975,764 to 1,977,110
_RS08710
HSERO_RS08715: HSERO_RS08715 - 2-dehydro-3-deoxygluconokinase, at 1,977,113 to 1,978,039
_RS08715
HSERO_RS08720: HSERO_RS08720 - amino acid deaminase, at 1,978,059 to 1,979,351
_RS08720
Position (kb) 1975
1976
1977
1978 Strain fitness (log2 ratio) -1
0
1 at 1974.902 kb on + strand, within HSERO_RS08705 at 1974.960 kb on + strand, within HSERO_RS08705 at 1975.001 kb on - strand, within HSERO_RS08705 at 1975.066 kb on - strand, within HSERO_RS08705 at 1975.327 kb on - strand, within HSERO_RS08705 at 1975.405 kb on + strand, within HSERO_RS08705 at 1975.413 kb on - strand at 1975.413 kb on - strand at 1975.535 kb on + strand at 1975.584 kb on - strand at 1975.903 kb on - strand, within HSERO_RS08710 at 1975.947 kb on - strand, within HSERO_RS08710 at 1975.984 kb on + strand, within HSERO_RS08710 at 1976.092 kb on - strand, within HSERO_RS08710 at 1976.520 kb on + strand, within HSERO_RS08710 at 1976.551 kb on - strand, within HSERO_RS08710 at 1976.983 kb on + strand at 1977.117 kb on - strand at 1977.216 kb on - strand, within HSERO_RS08715 at 1977.246 kb on + strand, within HSERO_RS08715 at 1977.248 kb on + strand, within HSERO_RS08715 at 1977.318 kb on - strand, within HSERO_RS08715 at 1977.374 kb on - strand, within HSERO_RS08715 at 1977.501 kb on - strand, within HSERO_RS08715 at 1977.885 kb on + strand, within HSERO_RS08715 at 1977.890 kb on + strand, within HSERO_RS08715 at 1977.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 1,974,902 + HSERO_RS08705 0.57 +0.5 1,974,960 + HSERO_RS08705 0.61 -1.0 1,975,001 - HSERO_RS08705 0.64 -0.3 1,975,066 - HSERO_RS08705 0.68 +0.8 1,975,327 - HSERO_RS08705 0.85 +0.6 1,975,405 + HSERO_RS08705 0.90 -0.6 1,975,413 - -0.4 1,975,413 - -0.2 1,975,535 + +0.0 1,975,584 - -0.4 1,975,903 - HSERO_RS08710 0.10 +0.1 1,975,947 - HSERO_RS08710 0.14 +0.6 1,975,984 + HSERO_RS08710 0.16 +1.2 1,976,092 - HSERO_RS08710 0.24 +0.7 1,976,520 + HSERO_RS08710 0.56 +0.1 1,976,551 - HSERO_RS08710 0.58 +0.3 1,976,983 + +0.3 1,977,117 - -0.2 1,977,216 - HSERO_RS08715 0.11 +0.1 1,977,246 + HSERO_RS08715 0.14 -0.2 1,977,248 + HSERO_RS08715 0.15 -0.1 1,977,318 - HSERO_RS08715 0.22 -0.2 1,977,374 - HSERO_RS08715 0.28 -1.2 1,977,501 - HSERO_RS08715 0.42 -0.1 1,977,885 + HSERO_RS08715 0.83 -0.6 1,977,890 + HSERO_RS08715 0.84 -0.2 1,977,959 - -0.1
Or see this region's nucleotide sequence