Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08685 and HSERO_RS08690 are separated by 54 nucleotides HSERO_RS08690 and HSERO_RS08695 are separated by 8 nucleotides HSERO_RS08695 and HSERO_RS08700 are separated by 232 nucleotides HSERO_RS08700 and HSERO_RS08705 are separated by 207 nucleotides
HSERO_RS08685: HSERO_RS08685 - hypothetical protein, at 1,970,534 to 1,971,031
_RS08685
HSERO_RS08690: HSERO_RS08690 - alpha/beta hydrolase, at 1,971,086 to 1,971,793
_RS08690
HSERO_RS08695: HSERO_RS08695 - PAS sensor protein, at 1,971,802 to 1,973,310
_RS08695
HSERO_RS08700: HSERO_RS08700 - hypothetical protein, at 1,973,543 to 1,973,815
_RS08700
HSERO_RS08705: HSERO_RS08705 - 2-aminoadipate aminotransferase, at 1,974,023 to 1,975,561
_RS08705
Position (kb) 1971
1972
1973
1974 Strain fitness (log2 ratio) -1
0
1
2 at 1970.892 kb on + strand, within HSERO_RS08685 at 1970.914 kb on + strand, within HSERO_RS08685 at 1970.947 kb on + strand, within HSERO_RS08685 at 1970.981 kb on - strand, within HSERO_RS08685 at 1971.490 kb on - strand, within HSERO_RS08690 at 1971.514 kb on - strand, within HSERO_RS08690 at 1971.575 kb on + strand, within HSERO_RS08690 at 1971.803 kb on - strand at 1971.850 kb on - strand at 1971.940 kb on - strand at 1971.971 kb on + strand, within HSERO_RS08695 at 1971.996 kb on - strand, within HSERO_RS08695 at 1972.054 kb on - strand, within HSERO_RS08695 at 1972.493 kb on - strand, within HSERO_RS08695 at 1972.498 kb on + strand, within HSERO_RS08695 at 1972.576 kb on - strand, within HSERO_RS08695 at 1972.614 kb on - strand, within HSERO_RS08695 at 1972.718 kb on - strand, within HSERO_RS08695 at 1972.910 kb on + strand, within HSERO_RS08695 at 1972.910 kb on + strand, within HSERO_RS08695 at 1973.094 kb on - strand, within HSERO_RS08695 at 1973.142 kb on + strand, within HSERO_RS08695 at 1973.226 kb on + strand at 1973.307 kb on + strand at 1973.427 kb on - strand at 1973.462 kb on + strand at 1973.473 kb on + strand at 1973.481 kb on - strand at 1973.638 kb on - strand, within HSERO_RS08700 at 1973.788 kb on + strand at 1973.810 kb on - strand at 1973.862 kb on - strand at 1973.886 kb on - strand at 1973.930 kb on + strand at 1973.938 kb on - strand at 1974.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 1,970,892 + HSERO_RS08685 0.72 +0.3 1,970,914 + HSERO_RS08685 0.76 -0.5 1,970,947 + HSERO_RS08685 0.83 +0.6 1,970,981 - HSERO_RS08685 0.90 +0.1 1,971,490 - HSERO_RS08690 0.57 -0.4 1,971,514 - HSERO_RS08690 0.60 -0.2 1,971,575 + HSERO_RS08690 0.69 -0.0 1,971,803 - +0.0 1,971,850 - -0.6 1,971,940 - -1.2 1,971,971 + HSERO_RS08695 0.11 -0.1 1,971,996 - HSERO_RS08695 0.13 +0.5 1,972,054 - HSERO_RS08695 0.17 +0.5 1,972,493 - HSERO_RS08695 0.46 +0.4 1,972,498 + HSERO_RS08695 0.46 +0.5 1,972,576 - HSERO_RS08695 0.51 -0.6 1,972,614 - HSERO_RS08695 0.54 +1.6 1,972,718 - HSERO_RS08695 0.61 +1.8 1,972,910 + HSERO_RS08695 0.73 +0.4 1,972,910 + HSERO_RS08695 0.73 +1.5 1,973,094 - HSERO_RS08695 0.86 -0.0 1,973,142 + HSERO_RS08695 0.89 +0.5 1,973,226 + -0.4 1,973,307 + +0.3 1,973,427 - -0.4 1,973,462 + +0.3 1,973,473 + +0.1 1,973,481 - -0.3 1,973,638 - HSERO_RS08700 0.35 +0.2 1,973,788 + -0.2 1,973,810 - -0.5 1,973,862 - +0.2 1,973,886 - +0.2 1,973,930 + -0.2 1,973,938 - -0.8 1,974,157 + -0.1
Or see this region's nucleotide sequence