Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08555 and HSERO_RS08560 are separated by 77 nucleotides HSERO_RS08560 and HSERO_RS08565 are separated by 30 nucleotides HSERO_RS08565 and HSERO_RS08570 are separated by 167 nucleotides HSERO_RS08570 and HSERO_RS08575 are separated by 8 nucleotides
HSERO_RS08555: HSERO_RS08555 - agmatinase, at 1,948,440 to 1,949,393
_RS08555
HSERO_RS08560: HSERO_RS08560 - GNAT family acetyltransferase, at 1,949,471 to 1,949,956
_RS08560
HSERO_RS08565: HSERO_RS08565 - RNA helicase, at 1,949,987 to 1,951,549
_RS08565
HSERO_RS08570: HSERO_RS08570 - esterase, at 1,951,717 to 1,952,472
_RS08570
HSERO_RS08575: HSERO_RS08575 - glyoxalase, at 1,952,481 to 1,953,020
_RS08575
Position (kb) 1949
1950
1951
1952 Strain fitness (log2 ratio) -1
0
1 at 1949.149 kb on - strand, within HSERO_RS08555 at 1949.302 kb on + strand at 1949.493 kb on + strand at 1949.522 kb on - strand, within HSERO_RS08560 at 1949.590 kb on + strand, within HSERO_RS08560 at 1949.637 kb on + strand, within HSERO_RS08560 at 1949.891 kb on - strand, within HSERO_RS08560 at 1950.022 kb on + strand at 1950.170 kb on + strand, within HSERO_RS08565 at 1951.108 kb on + strand, within HSERO_RS08565 at 1951.126 kb on - strand, within HSERO_RS08565 at 1951.306 kb on + strand, within HSERO_RS08565 at 1951.409 kb on + strand at 1951.412 kb on - strand at 1951.482 kb on - strand at 1951.493 kb on - strand at 1951.650 kb on - strand at 1951.650 kb on - strand at 1951.662 kb on + strand at 1951.662 kb on + strand at 1951.722 kb on - strand at 1951.749 kb on - strand at 1951.850 kb on + strand, within HSERO_RS08570 at 1952.157 kb on + strand, within HSERO_RS08570 at 1952.283 kb on + strand, within HSERO_RS08570 at 1952.297 kb on + strand, within HSERO_RS08570 at 1952.310 kb on - strand, within HSERO_RS08570 at 1952.317 kb on + strand, within HSERO_RS08570 at 1952.324 kb on + strand, within HSERO_RS08570 at 1952.337 kb on + strand at 1952.441 kb on + strand at 1952.467 kb on + strand at 1952.467 kb on + strand at 1952.475 kb on - strand at 1952.498 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 1,949,149 - HSERO_RS08555 0.74 +0.0 1,949,302 + -0.6 1,949,493 + +0.1 1,949,522 - HSERO_RS08560 0.10 -0.2 1,949,590 + HSERO_RS08560 0.24 -0.5 1,949,637 + HSERO_RS08560 0.34 -0.5 1,949,891 - HSERO_RS08560 0.86 -0.6 1,950,022 + -0.1 1,950,170 + HSERO_RS08565 0.12 +0.9 1,951,108 + HSERO_RS08565 0.72 +0.4 1,951,126 - HSERO_RS08565 0.73 +0.1 1,951,306 + HSERO_RS08565 0.84 +0.6 1,951,409 + +0.9 1,951,412 - -0.8 1,951,482 - +0.7 1,951,493 - +0.9 1,951,650 - -0.2 1,951,650 - -0.3 1,951,662 + +0.3 1,951,662 + -0.6 1,951,722 - +0.1 1,951,749 - +0.4 1,951,850 + HSERO_RS08570 0.18 +0.2 1,952,157 + HSERO_RS08570 0.58 -0.2 1,952,283 + HSERO_RS08570 0.75 -0.8 1,952,297 + HSERO_RS08570 0.77 -0.2 1,952,310 - HSERO_RS08570 0.78 +0.0 1,952,317 + HSERO_RS08570 0.79 +0.4 1,952,324 + HSERO_RS08570 0.80 +0.0 1,952,337 + +0.6 1,952,441 + -0.6 1,952,467 + -0.1 1,952,467 + +0.1 1,952,475 - -0.6 1,952,498 + -0.9
Or see this region's nucleotide sequence