Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS04465 and HSERO_RS04470 are separated by 2 nucleotides HSERO_RS04470 and HSERO_RS04475 overlap by 4 nucleotides HSERO_RS04475 and HSERO_RS04480 are separated by 5 nucleotides
HSERO_RS04465: HSERO_RS04465 - tail fiber assembly protein, at 983,532 to 983,804
_RS04465
HSERO_RS04470: HSERO_RS04470 - hypothetical protein, at 983,807 to 984,481
_RS04470
HSERO_RS04475: HSERO_RS04475 - tail fiber assembly protein, at 984,478 to 985,014
_RS04475
HSERO_RS04480: HSERO_RS04480 - tail protein, at 985,020 to 986,753
_RS04480
Position (kb) 984
985
986 Strain fitness (log2 ratio) -2
-1
0
1 at 983.813 kb on - strand at 983.929 kb on + strand, within HSERO_RS04470 at 983.929 kb on + strand, within HSERO_RS04470 at 983.941 kb on + strand at 984.021 kb on + strand, within HSERO_RS04470 at 984.359 kb on + strand, within HSERO_RS04470 at 984.372 kb on - strand, within HSERO_RS04470 at 984.891 kb on - strand, within HSERO_RS04475 at 985.062 kb on + strand at 985.099 kb on - strand at 985.139 kb on + strand at 985.391 kb on + strand, within HSERO_RS04480 at 985.752 kb on - strand, within HSERO_RS04480 at 985.775 kb on + strand, within HSERO_RS04480 at 985.777 kb on - strand, within HSERO_RS04480 at 985.948 kb on + strand, within HSERO_RS04480 at 985.956 kb on - strand, within HSERO_RS04480 at 985.984 kb on + strand, within HSERO_RS04480
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 983,813 - +0.9 983,929 + HSERO_RS04470 0.18 +0.3 983,929 + HSERO_RS04470 0.18 +1.0 983,941 + +1.3 984,021 + HSERO_RS04470 0.32 -0.9 984,359 + HSERO_RS04470 0.82 -1.8 984,372 - HSERO_RS04470 0.84 -0.1 984,891 - HSERO_RS04475 0.77 +0.6 985,062 + +0.2 985,099 - +1.5 985,139 + +0.0 985,391 + HSERO_RS04480 0.21 -0.2 985,752 - HSERO_RS04480 0.42 -1.1 985,775 + HSERO_RS04480 0.44 +0.4 985,777 - HSERO_RS04480 0.44 +0.4 985,948 + HSERO_RS04480 0.54 -0.6 985,956 - HSERO_RS04480 0.54 -0.6 985,984 + HSERO_RS04480 0.56 -1.3
Or see this region's nucleotide sequence