Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02340 and HSERO_RS02345 are separated by 114 nucleotides HSERO_RS02345 and HSERO_RS02350 overlap by 71 nucleotides HSERO_RS02350 and HSERO_RS02355 are separated by 226 nucleotides
HSERO_RS02340: HSERO_RS02340 - dihydroorotase, at 510,166 to 511,452
_RS02340
HSERO_RS02345: HSERO_RS02345 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 511,567 to 512,367
_RS02345
HSERO_RS02350: HSERO_RS02350 - diadenosine tetraphosphatase, at 512,297 to 513,121
_RS02350
HSERO_RS02355: HSERO_RS02355 - phosphoglucomutase, at 513,348 to 514,724
_RS02355
Position (kb) 512
513
514 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 511.347 kb on - strand at 511.605 kb on + strand at 511.646 kb on + strand at 511.740 kb on - strand, within HSERO_RS02345 at 511.925 kb on - strand, within HSERO_RS02345 at 511.996 kb on + strand, within HSERO_RS02345 at 512.062 kb on + strand, within HSERO_RS02345 at 512.070 kb on - strand, within HSERO_RS02345 at 512.070 kb on - strand, within HSERO_RS02345 at 512.075 kb on - strand, within HSERO_RS02345 at 512.077 kb on - strand, within HSERO_RS02345 at 512.173 kb on + strand, within HSERO_RS02345 at 512.208 kb on + strand, within HSERO_RS02345 at 512.216 kb on - strand, within HSERO_RS02345 at 512.361 kb on + strand at 512.369 kb on - strand at 512.445 kb on + strand, within HSERO_RS02350 at 512.485 kb on + strand, within HSERO_RS02350 at 512.506 kb on - strand, within HSERO_RS02350 at 512.585 kb on + strand, within HSERO_RS02350 at 512.842 kb on - strand, within HSERO_RS02350 at 512.914 kb on + strand, within HSERO_RS02350 at 512.914 kb on + strand, within HSERO_RS02350 at 512.922 kb on - strand, within HSERO_RS02350 at 513.070 kb on + strand at 513.189 kb on + strand at 513.364 kb on - strand at 513.378 kb on - strand at 513.472 kb on - strand at 513.514 kb on + strand, within HSERO_RS02355 at 513.587 kb on + strand, within HSERO_RS02355 at 513.613 kb on + strand, within HSERO_RS02355 at 513.679 kb on - strand, within HSERO_RS02355 at 513.794 kb on + strand, within HSERO_RS02355 at 513.802 kb on - strand, within HSERO_RS02355 at 514.072 kb on + strand, within HSERO_RS02355 at 514.091 kb on - strand, within HSERO_RS02355
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM remove 511,347 - -3.4 511,605 + +0.7 511,646 + +0.3 511,740 - HSERO_RS02345 0.22 -0.9 511,925 - HSERO_RS02345 0.45 +0.2 511,996 + HSERO_RS02345 0.54 +0.1 512,062 + HSERO_RS02345 0.62 -0.1 512,070 - HSERO_RS02345 0.63 -0.6 512,070 - HSERO_RS02345 0.63 +0.1 512,075 - HSERO_RS02345 0.63 +0.3 512,077 - HSERO_RS02345 0.64 -1.0 512,173 + HSERO_RS02345 0.76 -0.9 512,208 + HSERO_RS02345 0.80 +0.3 512,216 - HSERO_RS02345 0.81 +0.0 512,361 + +1.1 512,369 - -2.6 512,445 + HSERO_RS02350 0.18 +0.4 512,485 + HSERO_RS02350 0.23 +0.6 512,506 - HSERO_RS02350 0.25 +0.9 512,585 + HSERO_RS02350 0.35 +0.2 512,842 - HSERO_RS02350 0.66 +0.4 512,914 + HSERO_RS02350 0.75 +0.9 512,914 + HSERO_RS02350 0.75 +2.1 512,922 - HSERO_RS02350 0.76 -0.2 513,070 + +0.8 513,189 + -0.0 513,364 - -0.7 513,378 - -0.6 513,472 - -0.6 513,514 + HSERO_RS02355 0.12 -0.5 513,587 + HSERO_RS02355 0.17 +0.3 513,613 + HSERO_RS02355 0.19 -0.3 513,679 - HSERO_RS02355 0.24 -0.9 513,794 + HSERO_RS02355 0.32 +0.1 513,802 - HSERO_RS02355 0.33 -0.1 514,072 + HSERO_RS02355 0.53 -0.2 514,091 - HSERO_RS02355 0.54 +0.4
Or see this region's nucleotide sequence