Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19650
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
4,106,096 | + | BWI76_RS19645 | 0.49 | -1.1 | |
4,106,111 | + | BWI76_RS19645 | 0.50 | -1.7 | |
4,106,187 | - | BWI76_RS19645 | 0.58 | +0.5 | |
4,106,239 | + | BWI76_RS19645 | 0.63 | -0.5 | |
4,106,295 | - | BWI76_RS19645 | 0.69 | +0.1 | |
4,106,466 | + | BWI76_RS19645 | 0.86 | +0.7 | |
4,106,471 | + | BWI76_RS19645 | 0.86 | +0.1 | |
4,106,532 | + | -0.0 | |||
4,106,538 | - | -0.1 | |||
4,106,587 | + | -0.3 | |||
4,106,610 | + | -0.5 | |||
4,106,718 | + | -1.1 | |||
4,106,802 | + | +0.4 | |||
4,107,004 | + | BWI76_RS19650 | 0.11 | -1.0 | |
4,107,181 | + | BWI76_RS19650 | 0.28 | -1.2 | |
4,107,198 | - | BWI76_RS19650 | 0.30 | -1.3 | |
4,107,207 | + | BWI76_RS19650 | 0.30 | -0.5 | |
4,107,398 | + | BWI76_RS19650 | 0.49 | +1.0 | |
4,107,434 | - | BWI76_RS19650 | 0.53 | -0.5 | |
4,107,528 | + | BWI76_RS19650 | 0.62 | -1.7 | |
4,107,680 | + | BWI76_RS19650 | 0.77 | +0.4 | |
4,107,850 | + | +0.1 | |||
4,108,026 | - | +0.1 | |||
4,108,231 | - | BWI76_RS19655 | 0.14 | -0.3 | |
4,108,385 | - | BWI76_RS19655 | 0.27 | -0.2 | |
4,108,552 | + | BWI76_RS19655 | 0.41 | -0.3 |
Or see this region's nucleotide sequence