Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06920 and BWI76_RS06925 are separated by 136 nucleotides BWI76_RS06925 and BWI76_RS06930 overlap by 14 nucleotides BWI76_RS06930 and BWI76_RS06935 are separated by 96 nucleotides
BWI76_RS06920: BWI76_RS06920 - paraslipin, at 1,454,041 to 1,454,958
_RS06920
BWI76_RS06925: BWI76_RS06925 - iron ABC transporter ATP-binding protein FetA, at 1,455,095 to 1,455,775
_RS06925
BWI76_RS06930: BWI76_RS06930 - iron export ABC transporter permease subunit FetB, at 1,455,762 to 1,456,544
_RS06930
BWI76_RS06935: BWI76_RS06935 - co-chaperone YbbN, at 1,456,641 to 1,457,495
_RS06935
Position (kb)
1455
1456 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1454.138 kb on + strand, within BWI76_RS06920 at 1454.138 kb on + strand, within BWI76_RS06920 at 1454.144 kb on - strand, within BWI76_RS06920 at 1454.146 kb on - strand, within BWI76_RS06920 at 1454.154 kb on - strand, within BWI76_RS06920 at 1454.434 kb on - strand, within BWI76_RS06920 at 1454.586 kb on + strand, within BWI76_RS06920 at 1454.594 kb on - strand, within BWI76_RS06920 at 1454.604 kb on - strand, within BWI76_RS06920 at 1454.604 kb on - strand, within BWI76_RS06920 at 1454.658 kb on + strand, within BWI76_RS06920 at 1454.666 kb on - strand, within BWI76_RS06920 at 1454.699 kb on - strand, within BWI76_RS06920 at 1454.821 kb on + strand, within BWI76_RS06920 at 1454.868 kb on - strand at 1454.868 kb on - strand at 1455.003 kb on - strand at 1455.008 kb on + strand at 1455.008 kb on + strand at 1455.063 kb on + strand at 1455.069 kb on - strand at 1455.152 kb on - strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.167 kb on - strand, within BWI76_RS06925 at 1455.167 kb on - strand, within BWI76_RS06925 at 1455.181 kb on + strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.203 kb on - strand, within BWI76_RS06925 at 1455.215 kb on - strand, within BWI76_RS06925 at 1455.341 kb on + strand, within BWI76_RS06925 at 1455.341 kb on + strand, within BWI76_RS06925 at 1455.349 kb on - strand, within BWI76_RS06925 at 1455.368 kb on - strand, within BWI76_RS06925 at 1455.368 kb on - strand, within BWI76_RS06925 at 1455.375 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand at 1455.391 kb on - strand, within BWI76_RS06925 at 1455.391 kb on - strand, within BWI76_RS06925 at 1455.470 kb on - strand, within BWI76_RS06925 at 1455.516 kb on - strand, within BWI76_RS06925 at 1455.670 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.685 kb on - strand, within BWI76_RS06925 at 1455.685 kb on - strand, within BWI76_RS06925 at 1455.715 kb on - strand at 1455.789 kb on + strand at 1455.907 kb on - strand, within BWI76_RS06930 at 1455.982 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.079 kb on - strand, within BWI76_RS06930 at 1456.085 kb on - strand at 1456.247 kb on + strand, within BWI76_RS06930 at 1456.444 kb on - strand, within BWI76_RS06930 at 1456.518 kb on - strand at 1456.760 kb on - strand, within BWI76_RS06935
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,454,138 + BWI76_RS06920 0.11 +0.7 1,454,138 + BWI76_RS06920 0.11 +0.3 1,454,144 - BWI76_RS06920 0.11 -0.2 1,454,146 - BWI76_RS06920 0.11 -1.2 1,454,154 - BWI76_RS06920 0.12 -0.3 1,454,434 - BWI76_RS06920 0.43 +0.1 1,454,586 + BWI76_RS06920 0.59 +0.1 1,454,594 - BWI76_RS06920 0.60 +0.1 1,454,604 - BWI76_RS06920 0.61 +0.8 1,454,604 - BWI76_RS06920 0.61 -0.5 1,454,658 + BWI76_RS06920 0.67 +0.5 1,454,666 - BWI76_RS06920 0.68 -0.9 1,454,699 - BWI76_RS06920 0.72 -2.3 1,454,821 + BWI76_RS06920 0.85 +0.8 1,454,868 - -0.4 1,454,868 - +0.2 1,455,003 - +0.1 1,455,008 + +2.0 1,455,008 + +2.9 1,455,063 + -0.3 1,455,069 - -0.3 1,455,152 - -0.7 1,455,159 + -0.6 1,455,159 + +0.1 1,455,159 + +0.8 1,455,159 + -1.1 1,455,167 - BWI76_RS06925 0.11 -1.6 1,455,167 - BWI76_RS06925 0.11 -0.7 1,455,181 + BWI76_RS06925 0.13 -1.4 1,455,189 - BWI76_RS06925 0.14 -1.8 1,455,189 - BWI76_RS06925 0.14 -1.0 1,455,189 - BWI76_RS06925 0.14 -1.4 1,455,203 - BWI76_RS06925 0.16 -0.1 1,455,215 - BWI76_RS06925 0.18 -2.6 1,455,341 + BWI76_RS06925 0.36 -1.1 1,455,341 + BWI76_RS06925 0.36 -0.8 1,455,349 - BWI76_RS06925 0.37 -0.8 1,455,368 - BWI76_RS06925 0.40 +0.3 1,455,368 - BWI76_RS06925 0.40 -1.0 1,455,375 + BWI76_RS06925 0.41 -0.2 1,455,383 + BWI76_RS06925 0.42 -0.6 1,455,383 + BWI76_RS06925 0.42 -0.3 1,455,383 + -1.2 1,455,391 - BWI76_RS06925 0.43 +0.6 1,455,391 - BWI76_RS06925 0.43 -0.3 1,455,470 - BWI76_RS06925 0.55 +0.0 1,455,516 - BWI76_RS06925 0.62 -0.9 1,455,670 + BWI76_RS06925 0.84 -0.4 1,455,677 + BWI76_RS06925 0.85 +0.3 1,455,677 + BWI76_RS06925 0.85 -0.9 1,455,677 + BWI76_RS06925 0.85 +0.3 1,455,685 - BWI76_RS06925 0.87 -0.5 1,455,685 - BWI76_RS06925 0.87 -0.5 1,455,715 - +1.2 1,455,789 + -1.6 1,455,907 - BWI76_RS06930 0.19 +0.7 1,455,982 + BWI76_RS06930 0.28 -0.9 1,456,071 + BWI76_RS06930 0.39 +0.4 1,456,071 + BWI76_RS06930 0.39 -0.6 1,456,071 + BWI76_RS06930 0.39 +0.1 1,456,079 - BWI76_RS06930 0.40 +0.1 1,456,085 - +0.0 1,456,247 + BWI76_RS06930 0.62 -1.2 1,456,444 - BWI76_RS06930 0.87 -1.4 1,456,518 - -0.9 1,456,760 - BWI76_RS06935 0.14 +0.0
Or see this region's nucleotide sequence