Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09515 and AO353_09520 overlap by 8 nucleotides AO353_09520 and AO353_09525 overlap by 1 nucleotides AO353_09525 and AO353_09530 overlap by 1 nucleotides
AO353_09515: AO353_09515 - type VI secretion protein, at 2,084,577 to 2,086,319
_09515
AO353_09520: AO353_09520 - hypothetical protein, at 2,086,312 to 2,087,508
_09520
AO353_09525: AO353_09525 - ABC transporter ATP-binding protein, at 2,087,508 to 2,088,224
_09525
AO353_09530: AO353_09530 - serine/threonine protein kinase, at 2,088,224 to 2,091,268
_09530
Position (kb)
2086
2087
2088 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2085.325 kb on + strand, within AO353_09515 at 2085.325 kb on + strand, within AO353_09515 at 2085.325 kb on + strand, within AO353_09515 at 2085.325 kb on + strand, within AO353_09515 at 2085.325 kb on + strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.326 kb on - strand, within AO353_09515 at 2085.721 kb on + strand, within AO353_09515 at 2085.722 kb on - strand, within AO353_09515 at 2085.742 kb on + strand, within AO353_09515 at 2085.742 kb on + strand, within AO353_09515 at 2085.742 kb on + strand, within AO353_09515 at 2085.743 kb on - strand, within AO353_09515 at 2085.916 kb on + strand, within AO353_09515 at 2085.916 kb on + strand, within AO353_09515 at 2085.916 kb on + strand, within AO353_09515 at 2085.916 kb on + strand, within AO353_09515 at 2085.916 kb on + strand, within AO353_09515 at 2085.917 kb on - strand, within AO353_09515 at 2085.931 kb on + strand, within AO353_09515 at 2085.931 kb on + strand, within AO353_09515 at 2085.931 kb on + strand, within AO353_09515 at 2085.932 kb on - strand, within AO353_09515 at 2085.932 kb on - strand, within AO353_09515 at 2085.932 kb on - strand, within AO353_09515 at 2086.037 kb on + strand, within AO353_09515 at 2086.037 kb on + strand, within AO353_09515 at 2086.038 kb on - strand, within AO353_09515 at 2086.038 kb on - strand, within AO353_09515 at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.150 kb on + strand at 2086.151 kb on - strand at 2086.151 kb on - strand at 2086.151 kb on - strand at 2086.151 kb on - strand at 2086.151 kb on - strand at 2086.151 kb on - strand at 2086.157 kb on - strand at 2086.308 kb on + strand at 2086.309 kb on - strand at 2086.309 kb on - strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.313 kb on + strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.314 kb on - strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.315 kb on + strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.316 kb on - strand at 2086.445 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.468 kb on + strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.469 kb on - strand, within AO353_09520 at 2086.499 kb on + strand, within AO353_09520 at 2086.499 kb on + strand, within AO353_09520 at 2086.499 kb on + strand, within AO353_09520 at 2086.500 kb on - strand, within AO353_09520 at 2086.500 kb on - strand, within AO353_09520 at 2086.517 kb on - strand, within AO353_09520 at 2086.538 kb on + strand, within AO353_09520 at 2086.591 kb on + strand, within AO353_09520 at 2086.591 kb on + strand, within AO353_09520 at 2086.591 kb on + strand, within AO353_09520 at 2086.784 kb on + strand, within AO353_09520 at 2086.784 kb on + strand, within AO353_09520 at 2086.785 kb on - strand, within AO353_09520 at 2086.785 kb on - strand, within AO353_09520 at 2086.785 kb on - strand, within AO353_09520 at 2086.785 kb on - strand, within AO353_09520 at 2086.823 kb on + strand, within AO353_09520 at 2086.841 kb on + strand, within AO353_09520 at 2086.841 kb on + strand, within AO353_09520 at 2086.843 kb on + strand, within AO353_09520 at 2086.843 kb on + strand, within AO353_09520 at 2086.843 kb on + strand, within AO353_09520 at 2086.844 kb on - strand, within AO353_09520 at 2086.844 kb on - strand, within AO353_09520 at 2086.844 kb on - strand, within AO353_09520 at 2087.110 kb on + strand, within AO353_09520 at 2087.110 kb on + strand, within AO353_09520 at 2087.110 kb on + strand, within AO353_09520 at 2087.110 kb on + strand, within AO353_09520 at 2087.111 kb on - strand, within AO353_09520 at 2087.111 kb on - strand, within AO353_09520 at 2087.287 kb on - strand, within AO353_09520 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.937 kb on + strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.938 kb on - strand, within AO353_09525 at 2087.941 kb on + strand, within AO353_09525 at 2087.941 kb on + strand, within AO353_09525 at 2087.941 kb on + strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2087.942 kb on - strand, within AO353_09525 at 2088.173 kb on - strand at 2088.252 kb on + strand at 2088.252 kb on + strand at 2088.252 kb on + strand at 2088.252 kb on + strand at 2088.253 kb on - strand at 2088.253 kb on - strand at 2088.321 kb on + strand at 2088.321 kb on + strand at 2088.321 kb on + strand at 2088.321 kb on + strand at 2088.322 kb on - strand at 2088.322 kb on - strand at 2088.322 kb on - strand at 2088.322 kb on - strand at 2088.322 kb on - strand at 2088.353 kb on - strand at 2088.441 kb on + strand at 2088.441 kb on + strand at 2088.441 kb on + strand at 2088.442 kb on - strand at 2088.442 kb on - strand at 2088.442 kb on - strand at 2088.442 kb on - strand at 2088.442 kb on - strand at 2088.442 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,085,325 + AO353_09515 0.43 -1.2 2,085,325 + AO353_09515 0.43 -0.4 2,085,325 + AO353_09515 0.43 -1.8 2,085,325 + AO353_09515 0.43 +0.1 2,085,325 + AO353_09515 0.43 -2.0 2,085,326 - AO353_09515 0.43 -0.5 2,085,326 - AO353_09515 0.43 +0.1 2,085,326 - AO353_09515 0.43 +0.1 2,085,326 - AO353_09515 0.43 +0.3 2,085,326 - AO353_09515 0.43 -1.1 2,085,326 - AO353_09515 0.43 -1.1 2,085,326 - AO353_09515 0.43 +0.2 2,085,721 + AO353_09515 0.66 -0.7 2,085,722 - AO353_09515 0.66 -1.3 2,085,742 + AO353_09515 0.67 -0.5 2,085,742 + AO353_09515 0.67 -0.0 2,085,742 + AO353_09515 0.67 -0.5 2,085,743 - AO353_09515 0.67 -0.7 2,085,916 + AO353_09515 0.77 -1.2 2,085,916 + AO353_09515 0.77 -0.1 2,085,916 + AO353_09515 0.77 -1.2 2,085,916 + AO353_09515 0.77 +0.4 2,085,916 + AO353_09515 0.77 -1.8 2,085,917 - AO353_09515 0.77 +0.6 2,085,931 + AO353_09515 0.78 -0.7 2,085,931 + AO353_09515 0.78 -0.7 2,085,931 + AO353_09515 0.78 +1.1 2,085,932 - AO353_09515 0.78 +0.5 2,085,932 - AO353_09515 0.78 -2.2 2,085,932 - AO353_09515 0.78 -1.1 2,086,037 + AO353_09515 0.84 -0.9 2,086,037 + AO353_09515 0.84 +0.8 2,086,038 - AO353_09515 0.84 +0.5 2,086,038 - AO353_09515 0.84 -0.4 2,086,150 + +0.8 2,086,150 + +0.7 2,086,150 + +0.0 2,086,150 + -1.8 2,086,150 + +0.2 2,086,150 + -0.3 2,086,150 + +0.8 2,086,150 + -0.7 2,086,151 - +1.3 2,086,151 - +0.8 2,086,151 - -0.2 2,086,151 - +1.5 2,086,151 - +1.2 2,086,151 - +0.1 2,086,157 - -0.4 2,086,308 + -0.8 2,086,309 - +0.8 2,086,309 - -0.2 2,086,313 + +0.0 2,086,313 + -0.7 2,086,313 + -0.5 2,086,313 + -1.2 2,086,313 + +0.2 2,086,313 + +1.7 2,086,313 + +0.5 2,086,313 + -2.2 2,086,313 + -0.7 2,086,313 + +0.1 2,086,313 + +0.1 2,086,313 + +1.6 2,086,313 + +0.7 2,086,313 + -0.2 2,086,313 + -1.7 2,086,313 + -1.4 2,086,313 + -0.6 2,086,313 + +0.5 2,086,313 + +0.5 2,086,313 + +1.0 2,086,314 - -0.9 2,086,314 - +0.0 2,086,314 - +0.5 2,086,314 - -1.4 2,086,314 - -0.7 2,086,314 - -0.7 2,086,314 - +0.0 2,086,314 - -1.4 2,086,314 - +1.1 2,086,314 - +1.2 2,086,314 - -0.2 2,086,314 - +0.0 2,086,314 - +1.8 2,086,314 - +0.9 2,086,314 - +0.9 2,086,314 - -0.1 2,086,315 + +1.1 2,086,315 + +1.6 2,086,315 + +0.4 2,086,315 + -0.7 2,086,315 + +0.1 2,086,315 + +0.8 2,086,315 + -0.1 2,086,316 - -0.2 2,086,316 - +0.8 2,086,316 - -0.2 2,086,316 - +0.5 2,086,316 - -0.5 2,086,316 - -0.5 2,086,316 - +0.3 2,086,316 - -2.5 2,086,316 - +2.3 2,086,316 - +0.3 2,086,316 - +0.9 2,086,445 + AO353_09520 0.11 +1.5 2,086,468 + AO353_09520 0.13 +0.4 2,086,468 + AO353_09520 0.13 -0.5 2,086,468 + AO353_09520 0.13 -2.2 2,086,468 + AO353_09520 0.13 +1.5 2,086,468 + AO353_09520 0.13 -0.1 2,086,468 + AO353_09520 0.13 +0.9 2,086,468 + AO353_09520 0.13 +0.8 2,086,468 + AO353_09520 0.13 +0.9 2,086,468 + AO353_09520 0.13 -0.0 2,086,469 - AO353_09520 0.13 -0.9 2,086,469 - AO353_09520 0.13 +0.5 2,086,469 - AO353_09520 0.13 -0.2 2,086,469 - AO353_09520 0.13 -2.2 2,086,469 - AO353_09520 0.13 -0.8 2,086,469 - AO353_09520 0.13 +0.6 2,086,469 - AO353_09520 0.13 +0.8 2,086,469 - AO353_09520 0.13 +0.6 2,086,469 - AO353_09520 0.13 +0.3 2,086,469 - AO353_09520 0.13 +0.6 2,086,469 - AO353_09520 0.13 -0.2 2,086,469 - AO353_09520 0.13 -0.2 2,086,469 - AO353_09520 0.13 +0.4 2,086,469 - AO353_09520 0.13 -0.5 2,086,499 + AO353_09520 0.16 +1.2 2,086,499 + AO353_09520 0.16 -0.5 2,086,499 + AO353_09520 0.16 +0.0 2,086,500 - AO353_09520 0.16 +0.2 2,086,500 - AO353_09520 0.16 +1.2 2,086,517 - AO353_09520 0.17 +0.1 2,086,538 + AO353_09520 0.19 +0.5 2,086,591 + AO353_09520 0.23 +0.3 2,086,591 + AO353_09520 0.23 +0.3 2,086,591 + AO353_09520 0.23 +0.1 2,086,784 + AO353_09520 0.39 +0.8 2,086,784 + AO353_09520 0.39 +1.1 2,086,785 - AO353_09520 0.40 +1.2 2,086,785 - AO353_09520 0.40 -1.7 2,086,785 - AO353_09520 0.40 +0.0 2,086,785 - AO353_09520 0.40 -0.7 2,086,823 + AO353_09520 0.43 +0.5 2,086,841 + AO353_09520 0.44 -0.2 2,086,841 + AO353_09520 0.44 -1.1 2,086,843 + AO353_09520 0.44 -0.4 2,086,843 + AO353_09520 0.44 +0.6 2,086,843 + AO353_09520 0.44 +1.4 2,086,844 - AO353_09520 0.44 -0.7 2,086,844 - AO353_09520 0.44 +0.3 2,086,844 - AO353_09520 0.44 +0.4 2,087,110 + AO353_09520 0.67 +0.5 2,087,110 + AO353_09520 0.67 -1.5 2,087,110 + AO353_09520 0.67 -0.1 2,087,110 + AO353_09520 0.67 +0.6 2,087,111 - AO353_09520 0.67 +0.2 2,087,111 - AO353_09520 0.67 +0.5 2,087,287 - AO353_09520 0.81 -0.1 2,087,937 + AO353_09525 0.60 -1.4 2,087,937 + AO353_09525 0.60 +0.8 2,087,937 + AO353_09525 0.60 +0.8 2,087,937 + AO353_09525 0.60 -3.1 2,087,937 + AO353_09525 0.60 -0.2 2,087,937 + AO353_09525 0.60 +0.5 2,087,937 + AO353_09525 0.60 -1.0 2,087,937 + AO353_09525 0.60 +0.1 2,087,938 - AO353_09525 0.60 -0.2 2,087,938 - AO353_09525 0.60 -0.2 2,087,938 - AO353_09525 0.60 -0.1 2,087,938 - AO353_09525 0.60 -1.1 2,087,938 - AO353_09525 0.60 +0.4 2,087,938 - AO353_09525 0.60 -0.7 2,087,938 - AO353_09525 0.60 +0.0 2,087,938 - AO353_09525 0.60 +2.3 2,087,938 - AO353_09525 0.60 +1.6 2,087,938 - AO353_09525 0.60 +1.2 2,087,938 - AO353_09525 0.60 +1.0 2,087,938 - AO353_09525 0.60 +0.1 2,087,938 - AO353_09525 0.60 -0.3 2,087,938 - AO353_09525 0.60 +0.3 2,087,938 - AO353_09525 0.60 +0.9 2,087,938 - AO353_09525 0.60 +0.5 2,087,941 + AO353_09525 0.60 +2.0 2,087,941 + AO353_09525 0.60 +0.3 2,087,941 + AO353_09525 0.60 -1.7 2,087,942 - AO353_09525 0.61 -0.8 2,087,942 - AO353_09525 0.61 -1.4 2,087,942 - AO353_09525 0.61 -1.0 2,087,942 - AO353_09525 0.61 -0.2 2,087,942 - AO353_09525 0.61 +0.3 2,087,942 - AO353_09525 0.61 -0.5 2,087,942 - AO353_09525 0.61 -0.2 2,088,173 - -0.2 2,088,252 + -0.1 2,088,252 + -0.5 2,088,252 + +0.4 2,088,252 + -0.1 2,088,253 - -0.2 2,088,253 - +1.9 2,088,321 + -0.5 2,088,321 + +0.2 2,088,321 + -1.1 2,088,321 + -0.0 2,088,322 - +0.6 2,088,322 - -1.4 2,088,322 - -1.5 2,088,322 - -1.7 2,088,322 - +1.3 2,088,353 - +2.9 2,088,441 + -1.7 2,088,441 + -2.1 2,088,441 + +0.2 2,088,442 - +1.3 2,088,442 - +1.5 2,088,442 - +0.4 2,088,442 - -0.5 2,088,442 - +0.1 2,088,442 - -0.7
Or see this region's nucleotide sequence